Miyakogusa Predicted Gene

Lj6g3v2017410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2017410.1 Non Chatacterized Hit- tr|B4FQ41|B4FQ41_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,58.88,3e-19,Auxin_repressed,Dormancyauxin associated;
seg,NULL,CUFF.61054.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g31060.1                                                       170   3e-43
Glyma15g08300.2                                                       167   2e-42
Glyma13g31060.3                                                       162   6e-41
Glyma13g31060.2                                                       149   8e-37
Glyma15g08300.1                                                       147   4e-36
Glyma13g31060.4                                                       126   5e-30

>Glyma13g31060.1 
          Length = 117

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 91/117 (77%), Gaps = 4/117 (3%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT-NIKDEGEGSKLQRNLSMXXXXXXXXXXXXX 59
           MVLLEKLWDDVVAGPQPERGLG LRKLTT    DEG+ SKLQ+ LSM             
Sbjct: 1   MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGDSSKLQKTLSMPSTPTIPMTPTTP 60

Query: 60  X---SGRKADNVWRSVFHPGSNSATKTIGGQMFDKPLPNTPTVYDWLYSGETRSKHR 113
               S RKADNVWRSVFHPGSNSATKTIG QMFDKPLPNTPTVYDWLYSGETRS+HR
Sbjct: 61  TTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDWLYSGETRSRHR 117


>Glyma15g08300.2 
          Length = 117

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 89/117 (76%), Positives = 91/117 (77%), Gaps = 4/117 (3%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT-NIKDEGEGSKLQRNLSMXXXXXXXXXXXXX 59
           MVLLEKLWDDVVAGPQPERGLG LRKLTT    DEGE SKLQ+ LSM             
Sbjct: 1   MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGESSKLQKTLSMPSTPTTPMTPTTP 60

Query: 60  X---SGRKADNVWRSVFHPGSNSATKTIGGQMFDKPLPNTPTVYDWLYSGETRSKHR 113
               S RKADNVWRSVFHPGSNSATKTIG QMFDKPLPNTPTVYDWLYSGETRS+HR
Sbjct: 61  TTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDWLYSGETRSRHR 117


>Glyma13g31060.3 
          Length = 114

 Score =  162 bits (411), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 86/116 (74%), Positives = 90/116 (77%), Gaps = 5/116 (4%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTTNIKDEGEGSKLQRNLSMXXXXXXXXXXXXXX 60
           MVLLEKLWDDVVAGPQPERGLG LRKLTT +K   + SKLQ+ LSM              
Sbjct: 1   MVLLEKLWDDVVAGPQPERGLGKLRKLTT-LKTR-DSSKLQKTLSMPSTPTIPMTPTTPT 58

Query: 61  ---SGRKADNVWRSVFHPGSNSATKTIGGQMFDKPLPNTPTVYDWLYSGETRSKHR 113
              S RKADNVWRSVFHPGSNSATKTIG QMFDKPLPNTPTVYDWLYSGETRS+HR
Sbjct: 59  TPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDWLYSGETRSRHR 114


>Glyma13g31060.2 
          Length = 106

 Score =  149 bits (375), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 80/106 (75%), Gaps = 4/106 (3%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT-NIKDEGEGSKLQRNLSMXXXXXXXXXXXXX 59
           MVLLEKLWDDVVAGPQPERGLG LRKLTT    DEG+ SKLQ+ LSM             
Sbjct: 1   MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGDSSKLQKTLSMPSTPTIPMTPTTP 60

Query: 60  X---SGRKADNVWRSVFHPGSNSATKTIGGQMFDKPLPNTPTVYDW 102
               S RKADNVWRSVFHPGSNSATKTIG QMFDKPLPNTPTVYDW
Sbjct: 61  TTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDW 106


>Glyma15g08300.1 
          Length = 120

 Score =  147 bits (370), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/106 (74%), Positives = 80/106 (75%), Gaps = 4/106 (3%)

Query: 1   MVLLEKLWDDVVAGPQPERGLGALRKLTT-NIKDEGEGSKLQRNLSMXXXXXXXXXXXXX 59
           MVLLEKLWDDVVAGPQPERGLG LRKLTT    DEGE SKLQ+ LSM             
Sbjct: 1   MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGESSKLQKTLSMPSTPTTPMTPTTP 60

Query: 60  X---SGRKADNVWRSVFHPGSNSATKTIGGQMFDKPLPNTPTVYDW 102
               S RKADNVWRSVFHPGSNSATKTIG QMFDKPLPNTPTVYDW
Sbjct: 61  TTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDW 106


>Glyma13g31060.4 
          Length = 115

 Score =  126 bits (317), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 66/90 (73%), Gaps = 3/90 (3%)

Query: 27  LTTNIKDEGEGSKLQRNLSMXXXXXXXXXXXXXX---SGRKADNVWRSVFHPGSNSATKT 83
           L  +I DEG+ SKLQ+ LSM                 S RKADNVWRSVFHPGSNSATKT
Sbjct: 26  LIVDIVDEGDSSKLQKTLSMPSTPTIPMTPTTPTTPGSARKADNVWRSVFHPGSNSATKT 85

Query: 84  IGGQMFDKPLPNTPTVYDWLYSGETRSKHR 113
           IG QMFDKPLPNTPTVYDWLYSGETRS+HR
Sbjct: 86  IGAQMFDKPLPNTPTVYDWLYSGETRSRHR 115