Miyakogusa Predicted Gene

Lj6g3v2007290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2007290.1 tr|B9N3I2|B9N3I2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_784299 PE=4
SV=1,46.81,0.0000000000001,HSP20,Alpha crystallin/Hsp20 domain;
ZF_C3H1,Zinc finger, CCCH-type; coiled-coil,NULL; seg,NULL;
zf-,CUFF.60522.1
         (859 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g31050.2                                                       369   e-101
Glyma13g31050.1                                                       369   e-101
Glyma15g08320.1                                                       287   3e-77
Glyma04g32250.1                                                        86   1e-16
Glyma06g22290.1                                                        85   3e-16
Glyma06g15720.1                                                        75   2e-13
Glyma04g39220.1                                                        74   9e-13
Glyma05g32400.1                                                        63   1e-09

>Glyma13g31050.2 
          Length = 431

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/270 (71%), Positives = 226/270 (83%), Gaps = 7/270 (2%)

Query: 595 DWEPSVPFQPSFFITSMNASIPRDLYGPVRDRIEIPNIGDGSLKATIL---TEKPASSQV 651
           DWEPSVPF+PSFFITSMN S P DLY P+RD IEIPNIGDGSLKA++L   +   ASSQV
Sbjct: 164 DWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNIQASSQV 223

Query: 652 RTY--AAVVGKHMSDLNEDKSSVSSHNRFYENEPNKSCVPREKDFLATETEITSGTYENY 709
           RTY  +AVVGKHM++LN+DKSSVSSHN+F ENEPNK+C+PREKD L  ETEITSGTY +Y
Sbjct: 224 RTYGDSAVVGKHMANLNDDKSSVSSHNKFCENEPNKNCLPREKDCLPPETEITSGTYVHY 283

Query: 710 QNGKIGMGQHTFGVKDVMEPEKEWAEHDTRHHGEGSSHKKRRVEMDKKIHEMDVDFQANG 769
           Q GK+GMGQHTF V D  + E++  E D R HGEGS  KK+RV+ DKK HEMDVDFQ +G
Sbjct: 284 Q-GKMGMGQHTFEVADNKKKERDLTECDARCHGEGSGRKKKRVDRDKKNHEMDVDFQMDG 342

Query: 770 SMQKETREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPT 829
           SMQKE++ +++FRA L+D VKELLKP+WHEGRLSKD+H +IVKKSVDKV++TLEPHQIPT
Sbjct: 343 SMQKESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIPT 402

Query: 830 SVDTAKNYVTSCRGKIAKLVMGYVTKYGKS 859
            +DTAK YV+S + KIAKLV GYV KYGKS
Sbjct: 403 -IDTAKQYVSSSQVKIAKLVNGYVNKYGKS 431



 Score = 50.8 bits (120), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 519 SKMNEEKASPSWHRSHENQKFLPRDNLFPESRFAFNA 555
           S  N+++A+PSWH S E QKF  RDNL PE+RF F+A
Sbjct: 2   SMQNQQEATPSWHPSQEKQKFPLRDNLVPENRFPFSA 38


>Glyma13g31050.1 
          Length = 431

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/270 (71%), Positives = 226/270 (83%), Gaps = 7/270 (2%)

Query: 595 DWEPSVPFQPSFFITSMNASIPRDLYGPVRDRIEIPNIGDGSLKATIL---TEKPASSQV 651
           DWEPSVPF+PSFFITSMN S P DLY P+RD IEIPNIGDGSLKA++L   +   ASSQV
Sbjct: 164 DWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNIQASSQV 223

Query: 652 RTY--AAVVGKHMSDLNEDKSSVSSHNRFYENEPNKSCVPREKDFLATETEITSGTYENY 709
           RTY  +AVVGKHM++LN+DKSSVSSHN+F ENEPNK+C+PREKD L  ETEITSGTY +Y
Sbjct: 224 RTYGDSAVVGKHMANLNDDKSSVSSHNKFCENEPNKNCLPREKDCLPPETEITSGTYVHY 283

Query: 710 QNGKIGMGQHTFGVKDVMEPEKEWAEHDTRHHGEGSSHKKRRVEMDKKIHEMDVDFQANG 769
           Q GK+GMGQHTF V D  + E++  E D R HGEGS  KK+RV+ DKK HEMDVDFQ +G
Sbjct: 284 Q-GKMGMGQHTFEVADNKKKERDLTECDARCHGEGSGRKKKRVDRDKKNHEMDVDFQMDG 342

Query: 770 SMQKETREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPT 829
           SMQKE++ +++FRA L+D VKELLKP+WHEGRLSKD+H +IVKKSVDKV++TLEPHQIPT
Sbjct: 343 SMQKESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIPT 402

Query: 830 SVDTAKNYVTSCRGKIAKLVMGYVTKYGKS 859
            +DTAK YV+S + KIAKLV GYV KYGKS
Sbjct: 403 -IDTAKQYVSSSQVKIAKLVNGYVNKYGKS 431



 Score = 50.8 bits (120), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 519 SKMNEEKASPSWHRSHENQKFLPRDNLFPESRFAFNA 555
           S  N+++A+PSWH S E QKF  RDNL PE+RF F+A
Sbjct: 2   SMQNQQEATPSWHPSQEKQKFPLRDNLVPENRFPFSA 38


>Glyma15g08320.1 
          Length = 464

 Score =  287 bits (735), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 160/246 (65%), Positives = 189/246 (76%), Gaps = 32/246 (13%)

Query: 618 DLYGPVRDRIEIPNIGDGSLKATIL---TEKPASSQVRTY--AAVVGKHMSDLNEDKSSV 672
           DLY P+RD IEIPNIGDGSLKA++L   +    SSQVRTY  +AVVG+HMS+LN+DKSSV
Sbjct: 245 DLYDPLRDSIEIPNIGDGSLKASLLIHGSNVQVSSQVRTYGDSAVVGEHMSNLNDDKSSV 304

Query: 673 SSHNRFYENEPNKSCVPREKDFLATETEITSGTYENYQNGKIGMGQHTFGVKDVMEPEKE 732
           SSHN+F ENEPNK+C+P EKD L  ETEITSGTY+    GK+GMGQHTFG          
Sbjct: 305 SSHNKFCENEPNKNCLPHEKDCLPPETEITSGTYQ----GKMGMGQHTFG---------- 350

Query: 733 WAEHDTRHHGEGSSHKKRRVEMDKKIHEMDVDFQANGSMQKETREVRYFRAALVDLVKEL 792
                       S HKK+RV+ DKK HEMDVDFQ +GS+QKE++ +++FRAALVD VKEL
Sbjct: 351 ------------SGHKKKRVDRDKKNHEMDVDFQIDGSIQKESKALKFFRAALVDHVKEL 398

Query: 793 LKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKNYVTSCRGKIAKLVMGY 852
           LKP+WHEG LSKD+H +IVKKSVDKV+STLEPHQIP  +DTAK YV+S + KIAKLV GY
Sbjct: 399 LKPAWHEGHLSKDAHIMIVKKSVDKVVSTLEPHQIPI-MDTAKQYVSSSQVKIAKLVNGY 457

Query: 853 VTKYGK 858
           V KYGK
Sbjct: 458 VNKYGK 463



 Score =  166 bits (421), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 93/113 (82%), Gaps = 3/113 (2%)

Query: 446 TISLSPSAEIKDGNKR---RCDFFAKGWCIRGSSCTFLHIKDVVNNTDREAEVDIVDAHL 502
           T +LSPSAEIKDGNKR    CDFFAKGWCIRGSSC+FLHIKD  +NTD+EAE D V  + 
Sbjct: 34  TRNLSPSAEIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGDNTDQEAEADSVSTYQ 93

Query: 503 KRGLKLEEGVKDNVRTSKMNEEKASPSWHRSHENQKFLPRDNLFPESRFAFNA 555
           KR LK+EEGV++NV  S+MNE++A+PSWH S E QKF PRDNLFP++RF F+A
Sbjct: 94  KRQLKVEEGVRENVERSRMNEQEATPSWHPSQEKQKFPPRDNLFPDNRFPFSA 146


>Glyma04g32250.1 
          Length = 744

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 58/86 (67%)

Query: 773 KETREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVD 832
           K++R ++ F+ ++ + VKE+LKPSW +G +SK +   IVKK+VDKV   ++ H++P S  
Sbjct: 658 KDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQT 717

Query: 833 TAKNYVTSCRGKIAKLVMGYVTKYGK 858
               Y+ S + K+ KLVMGYV KY K
Sbjct: 718 KISQYIDSSQRKLTKLVMGYVDKYVK 743


>Glyma06g22290.1 
          Length = 512

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 58/86 (67%)

Query: 773 KETREVRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVD 832
           K++R ++ F+ ++ + VKE+LKPSW +G +SK +   IVKK+VDKV   ++ H++P S  
Sbjct: 426 KDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQV 485

Query: 833 TAKNYVTSCRGKIAKLVMGYVTKYGK 858
               Y+ S + K+ KLVMGYV KY K
Sbjct: 486 KISQYIDSSQRKLTKLVMGYVDKYVK 511


>Glyma06g15720.1 
          Length = 828

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 54/81 (66%)

Query: 779 RYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKNYV 838
           R F+ ALV+ VKELLKP+W +G+++KD +  IVKK VDKV  +++   IP + +   +Y+
Sbjct: 748 RAFKFALVEFVKELLKPTWKDGQITKDDYKTIVKKVVDKVTGSMQGANIPQTQEKIDHYL 807

Query: 839 TSCRGKIAKLVMGYVTKYGKS 859
           +  + K+ KLV  YV K  K+
Sbjct: 808 SFSKPKLNKLVQAYVEKVQKA 828


>Glyma04g39220.1 
          Length = 416

 Score = 73.6 bits (179), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 54/81 (66%)

Query: 779 RYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKNYV 838
           R F+ ALV+ VKELLKP+W +G+++K+ +  IVKK VDKV  +++   IP + +   +Y+
Sbjct: 336 RAFKFALVEFVKELLKPTWKDGQITKEDYKTIVKKVVDKVTGSMQGVNIPQTQEKIDHYL 395

Query: 839 TSCRGKIAKLVMGYVTKYGKS 859
           +  + K+ KLV  YV K  K+
Sbjct: 396 SFSKPKLNKLVQAYVEKVQKA 416


>Glyma05g32400.1 
          Length = 74

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 48/72 (66%)

Query: 778 VRYFRAALVDLVKELLKPSWHEGRLSKDSHNLIVKKSVDKVISTLEPHQIPTSVDTAKNY 837
           +  F+ +LV+ VKELL P+W +G+++K+ +  IVKK  DKVI T++   IP + +    Y
Sbjct: 2   IHTFKFSLVEFVKELLNPTWKDGKITKEDYKAIVKKVTDKVIDTVQGAHIPQTQEKIDCY 61

Query: 838 VTSCRGKIAKLV 849
           ++S + K+ KLV
Sbjct: 62  LSSSKSKLNKLV 73