Miyakogusa Predicted Gene
- Lj6g3v2006970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2006970.1 Non Chatacterized Hit- tr|I3T3J6|I3T3J6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,63.04,3e-17,seg,NULL; coiled-coil,NULL,CUFF.60502.1
(292 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g30950.2 129 3e-30
Glyma13g30950.1 129 3e-30
Glyma13g24380.1 109 3e-24
Glyma07g32150.1 106 2e-23
Glyma15g18740.1 79 7e-15
Glyma15g08410.1 62 1e-09
>Glyma13g30950.2
Length = 272
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 104/150 (69%), Gaps = 18/150 (12%)
Query: 1 MAPFSNYISFLFFTALLLPLQIIARESQFFSKVTHFNNNNNVKEAELPNPNKDEQVTNKP 60
MAP SNYISFLF T LL LQI AR+SQFFSKVTHF+ N+ VKE ELPN K+ NKP
Sbjct: 1 MAPSSNYISFLFLTTLLFALQISARDSQFFSKVTHFDKNS-VKETELPN--KEAPEVNKP 57
Query: 61 EQQPAFIPETENSYGLYGHDDESAQLPSPTT--TTNQPLNTEFEDTSKYPNNKHSNYYNN 118
EQQP FIPETENSYGLYGH DE Q+PS TT T+ P TEFE++ NNK YYNN
Sbjct: 58 EQQPPFIPETENSYGLYGHHDEYNQVPSTTTNPTSYHPYKTEFENS----NNK---YYNN 110
Query: 119 DAYNTRLY------NKDALGNDQNELTYTK 142
DAYNTR NKD+ +Q EL+ TK
Sbjct: 111 DAYNTRFSETGYNNNKDSYEGNQYELSDTK 140
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 219 EKQGMSDTRFLEGGKYFYDMNNEKYNPTHYDDSYR 253
E+QGMSDTRFLEGGKYF+D+ EKYNPT+Y DS R
Sbjct: 205 ERQGMSDTRFLEGGKYFHDVAAEKYNPTNYGDSSR 239
>Glyma13g30950.1
Length = 272
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 104/150 (69%), Gaps = 18/150 (12%)
Query: 1 MAPFSNYISFLFFTALLLPLQIIARESQFFSKVTHFNNNNNVKEAELPNPNKDEQVTNKP 60
MAP SNYISFLF T LL LQI AR+SQFFSKVTHF+ N+ VKE ELPN K+ NKP
Sbjct: 1 MAPSSNYISFLFLTTLLFALQISARDSQFFSKVTHFDKNS-VKETELPN--KEAPEVNKP 57
Query: 61 EQQPAFIPETENSYGLYGHDDESAQLPSPTT--TTNQPLNTEFEDTSKYPNNKHSNYYNN 118
EQQP FIPETENSYGLYGH DE Q+PS TT T+ P TEFE++ NNK YYNN
Sbjct: 58 EQQPPFIPETENSYGLYGHHDEYNQVPSTTTNPTSYHPYKTEFENS----NNK---YYNN 110
Query: 119 DAYNTRLY------NKDALGNDQNELTYTK 142
DAYNTR NKD+ +Q EL+ TK
Sbjct: 111 DAYNTRFSETGYNNNKDSYEGNQYELSDTK 140
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 219 EKQGMSDTRFLEGGKYFYDMNNEKYNPTHYDDSYR 253
E+QGMSDTRFLEGGKYF+D+ EKYNPT+Y DS R
Sbjct: 205 ERQGMSDTRFLEGGKYFHDVAAEKYNPTNYGDSSR 239
>Glyma13g24380.1
Length = 372
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 105/215 (48%), Gaps = 49/215 (22%)
Query: 1 MAPFSNYISFLFFTALLLPLQIIARESQFFSKVTHFNNNNNVKEAELPNPNKDEQVTNKP 60
MAP S I FLF T LL+ LQ+ AR+SQFFSKVT NNN +KE E P K+E NKP
Sbjct: 1 MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPLNNN--IKETETP---KNEGQVNKP 55
Query: 61 EQQPAFIPETENSYGLYGHD--------DESAQLPSPTTTTNQPLNTEFEDTSKYPNNKH 112
EQQP FIPETENSYGLYGH+ + P TT T EDT+KY NN +
Sbjct: 56 EQQPTFIPETENSYGLYGHETGLHPPTTTTTNAAPYTTTYKPYKTTTAEEDTAKYSNNNN 115
Query: 113 SNYYNNDAYN---------TRLY-------------NKDALGNDQNELTYTKEGRGG--- 147
+ D YN TRL KDA QNEL+ TK GG
Sbjct: 116 FYSFKKDGYNTNQNELSETTRLTGTSYTNNNNYFYSGKDAFA-KQNELSDTKYTEGGYNT 174
Query: 148 ----------YNTPHIGNNQNELSYSEEGRGGYNS 172
YN QNELS ++ GYNS
Sbjct: 175 ENQNSNNNYFYNGKDAFGKQNELSDTKYTEEGYNS 209
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 219 EKQGMSDTRFLEGGKYFYDMNNEKYN-PTHYDDSYR 253
E+QG+SDTRF+EGGKYFYD+ +EKYN PT Y S R
Sbjct: 297 ERQGLSDTRFIEGGKYFYDVKSEKYNHPTQYGGSTR 332
>Glyma07g32150.1
Length = 376
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Query: 1 MAPFSNYISFLFFTALLLPLQIIARESQFFSKVTHFNNNNNVKEAELPNPNKDEQVTNKP 60
MAP S I FLF T LL+ LQ+ AR+SQFFSKVT NNN+KE E+P K+E NKP
Sbjct: 1 MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPL--NNNIKETEVP---KNEGQVNKP 55
Query: 61 EQQPAFIPETENSYGLYGHDDESAQLPSPTTTTN 94
EQQP F PETENSYGLYGH E+ P TT TN
Sbjct: 56 EQQPVFTPETENSYGLYGH--ETGLHPPTTTITN 87
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 219 EKQGMSDTRFLEGGKYFYDMNNEKYN-PTHYDDSYR 253
E+QG+SDTRF+EGGKYFYD+N+EKYN PT Y S R
Sbjct: 301 ERQGLSDTRFMEGGKYFYDVNSEKYNHPTQYGGSTR 336
>Glyma15g18740.1
Length = 189
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 105/230 (45%), Gaps = 50/230 (21%)
Query: 26 ESQFFSKVTHFNNNNNVKEAELPNPNKDEQVTNKPEQQPAFIPETENSYGLYGHDDESAQ 85
+SQFFSKVTHF+ +N VK ELPN ++ P ES Q
Sbjct: 1 DSQFFSKVTHFDKDN-VKVTELPN-----------KEAP-----------------ESNQ 31
Query: 86 LPSPTTTTNQPLNTEFEDTSKYPN--NKHSNYYNNDAYNTRLYNKDALGNDQNELTYTKE 143
+PS T T+ P TEFE+++ + ++ ++ +YN + YNKD+ +Q EL+ TK
Sbjct: 32 VPSTTPTSYHPYKTEFENSNNKNYNNDAYNTRFSETSYNNKYYNKDSYEGNQYELSDTKY 91
Query: 144 GRGGYNTPHIGNNQNELSYSEEGRGGYNSPRSHMGXXXXXXXXXXXXXXXXXERHYYSXX 203
GYN + + QN YN+ ++ Y S
Sbjct: 92 TEEGYNNKYHNSYQN----------NYNNDAANEKYSYNNNNNKNYNAHNNRYNTYNS-- 139
Query: 204 XXXXXXXXXXXXXXXEKQGMSDTRFLEGGKYFYDMNNEKYNPTHYDDSYR 253
E+QG+SDTRFLEGGKYFYD+ E YNPT+Y DS R
Sbjct: 140 -------NAVSRYNGERQGISDTRFLEGGKYFYDVGMEMYNPTNYGDSSR 182
>Glyma15g08410.1
Length = 228
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 219 EKQGMSDTRFLEGGKYFYDMNNEKYNPTHYDDSYR 253
E+QGMSDTRFLEGGKYFYD+ EKYNPT+Y DS R
Sbjct: 161 ERQGMSDTRFLEGGKYFYDVGAEKYNPTNYGDSSR 195
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 1 MAPFSNYISFLFFTALLLPLQIIARESQFFSKVTHFNNNNNVKEAELPN 49
MAP SNYISFLF T LL LQI AR+SQFFSKVTHF + +N K ELPN
Sbjct: 1 MAPSSNYISFLFLTTLLFALQITARDSQFFSKVTHF-DKDNAKVTELPN 48