Miyakogusa Predicted Gene

Lj6g3v1995740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1995740.1 Non Chatacterized Hit- tr|K4BZM2|K4BZM2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.58,0.000000000000001,TRANSCRIPTION FACTOR IIIB,NULL;
TRANSCRIPTION INITIATION FACTOR IIB-RELATED,Transcription factor
TFI,CUFF.60410.1
         (539 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g24940.1                                                       362   e-100
Glyma01g04990.1                                                       204   2e-52
Glyma03g29070.1                                                        55   2e-07
Glyma10g15700.1                                                        55   2e-07
Glyma02g32370.1                                                        50   9e-06

>Glyma04g24940.1 
          Length = 331

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/354 (55%), Positives = 232/354 (65%), Gaps = 25/354 (7%)

Query: 1   MSSSNSCIHCGKRSFTRDDTTGELFCSSCSAVQPFDNFEAQIGGINGPVGTFIRVGTAGA 60
           MS S+ C +CG+ SF  DD          S V+P       +               A +
Sbjct: 1   MSKSSPCTYCGEASFIHDDI---------STVRPIRWSSRNLHPY-----------CACS 40

Query: 61  GSHYSYKDRKLFTANTTIEELTHRLGLGSKTVDVKSMISQITEGEFGMGHWFEVLIGACA 120
            S YSY+ RKLF A   I E+T+ LGL  K+ DV+SMIS ITEGEFG G WF+VLIGAC 
Sbjct: 41  SSLYSYRQRKLFVAQNLINEVTNPLGLSFKSSDVRSMISTITEGEFGQGEWFKVLIGACI 100

Query: 121 YVIMRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSLERTLKN 180
           YV+MRK+DRPLPMAEVAS +  DVYE+ RMILRV+DFL L RPDFPEFDIVH LER ++N
Sbjct: 101 YVVMRKEDRPLPMAEVASTIGIDVYEISRMILRVVDFLNL-RPDFPEFDIVHLLERMIRN 159

Query: 181 SPSFADVEGWTLDRMRKQGVFLIQCAVKWYLSTGRRXXXXXXXXXXXXXXXXXXXXRMDD 240
               A  E   ++RMRKQG+FLIQCAVKWYLS   R                     M++
Sbjct: 160 CSGCASAERNLIERMRKQGMFLIQCAVKWYLSIEWRPVPLVVAVLVFMVELNGVGVGMEE 219

Query: 241 LAKEVHAVVSTCRTRYRELLETLVKVAQVLPWGKDITTKNIVRNAPFVIQYMEKKSMSKP 300
           LAKEVHA VSTCR RY+ELLETLVKVAQVLPWGKD+T KNI++NA   IQYME+ +M K 
Sbjct: 220 LAKEVHARVSTCRARYKELLETLVKVAQVLPWGKDVTVKNIIKNALVGIQYMERNAMLKH 279

Query: 301 GEKRKN-LDQPRLDLADVVAECLRQDDDDGGCEYGFIGIASRKDSQYFSLGSNA 353
           GEKR+  LDQ  +DL DVV ECLR   +DG  EYG  G++ RKDS+YF L SNA
Sbjct: 280 GEKREEGLDQATVDLKDVVVECLR---NDGEFEYGVDGMSKRKDSRYFMLESNA 330


>Glyma01g04990.1 
          Length = 222

 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/257 (47%), Positives = 142/257 (55%), Gaps = 63/257 (24%)

Query: 238 MDDLAKEVHAVVSTCRTRYRELLETLVKVAQVLPWGKDITTKNIVRNAPFVIQYMEKKSM 297
           M++LAKEVHA VSTCR RY+ELLETLVKVAQVLPWGKD+T KNIV+NAP VIQYME+K+M
Sbjct: 8   MEELAKEVHAKVSTCRARYKELLETLVKVAQVLPWGKDVTVKNIVKNAPIVIQYMERKAM 67

Query: 298 SKPGEKRKNLDQPRLDLADVVAECLRQDDDDGGCEYGFIGIASRKDSQYFSLGSNADLAA 357
            KPG+KR+ L                                              D AA
Sbjct: 68  LKPGKKREGL----------------------------------------------DRAA 81

Query: 358 IKDVDGFQISPECLSMLYKRFLEENRGAKFSNSDNAQKFQWSGLNLQDCREWWDGXXXXX 417
              VD   +  ECL              +   S NAQK +    +L +CREWWDG     
Sbjct: 82  ---VDLEDVVAECL--------------RNDGSGNAQKRRVLRFDLLECREWWDGKSELS 124

Query: 418 XXXXXXXXXXXDVGMDAMPPSFVTGQLKYKRRQEKINAAKMRIKRIAQPSEDGLGDILNP 477
                      DVG+D MPPSFV GQLK + R+E+INAAK+RIKRI  PS+  LGD   P
Sbjct: 125 KKLLLNRLLEKDVGVDTMPPSFVNGQLKCEMRRERINAAKVRIKRIMHPSDADLGDAEIP 184

Query: 478 DLLDDSYPERRRKKRRG 494
             LD SYPERRRKKR+G
Sbjct: 185 CPLDSSYPERRRKKRKG 201


>Glyma03g29070.1 
          Length = 306

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 31/198 (15%)

Query: 7   CIHCGKRS-FTRDDTTGELFCSSCSAV-----------------QPFDNFEAQIGGINGP 48
           C  C +++    D + G+  CS C  V                 +  DN   ++GG   P
Sbjct: 6   CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNP 65

Query: 49  V------GTFIRVGTAGAGSHYS-----YKDRKLFTANTTIEELTHRLGLGSKTVD-VKS 96
           +       T I     G+G   S     +++R L  A  TI  ++ RLGL +   D    
Sbjct: 66  LLTDGGLSTVIAKPNGGSGEFLSSSVGRWQNRGLIVAFKTIATMSDRLGLVATIKDRANE 125

Query: 97  MISQITEGEFGMGHWFEVLIGACAYVIMRKDDRPLPMAEVASAVDSDV-YELGRMILRVI 155
           +  ++ + +   G   + L+ AC Y+  R++D+P  + E+ S  +     E+GR    ++
Sbjct: 126 IYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIV 185

Query: 156 DFLGLKRPDFPEFDIVHS 173
             LGL++    E   +H+
Sbjct: 186 KQLGLEQGQSVEIGTIHA 203


>Glyma10g15700.1 
          Length = 313

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 38/205 (18%)

Query: 7   CIHCGKRS-FTRDDTTGELFCSSCSAV-----------------QPFDNFEAQIGGINGP 48
           C  C +++    D + G+  CS C  V                 +  DN   ++GG + P
Sbjct: 6   CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVGGPSNP 65

Query: 49  V------GTFIRVGTAGAGSHY------------SYKDRKLFTANTTIEELTHRLGLGSK 90
           +       T I     G G  +            S  DR L  A  TI  ++ RLGL + 
Sbjct: 66  LLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRLGLVAT 125

Query: 91  TVD-VKSMISQITEGEFGMGHWFEVLIGACAYVIMRKDDRPLPMAEVASAVDSDV-YELG 148
             D    +  ++ + +   G   + L+ AC Y+  R++D+P  + E+ S  +     E+G
Sbjct: 126 IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 185

Query: 149 RMILRVIDFLGLKRPDFPEFDIVHS 173
           R    ++  LGL+  +  E   +H+
Sbjct: 186 RAKEYIVKQLGLENGNAVEMGTIHA 210


>Glyma02g32370.1 
          Length = 314

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 39/206 (18%)

Query: 7   CIHCGKRS-FTRDDTTGELFCSSCSAV-----------------QPFDNFEAQIGGINGP 48
           C  C +++    D + G+  CS C  V                 +  DN   ++GG + P
Sbjct: 6   CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVGGPSNP 65

Query: 49  VGT-------------------FIRVGTAGAGSHYSYKDRKLFTANTTIEELTHRLGLGS 89
           + T                   F+        +  S  DR L  A  TI  ++ RLGL +
Sbjct: 66  LLTDGGLSTVIAKPNGGGGGGEFLSSSLGRWQNRGSNPDRALIIAFKTIATMSDRLGLVA 125

Query: 90  KTVD-VKSMISQITEGEFGMGHWFEVLIGACAYVIMRKDDRPLPMAEVASAVDSDV-YEL 147
              D    +  ++ + +   G   + L+ AC Y+  R++D+P  + E+ S  +     E+
Sbjct: 126 TIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEI 185

Query: 148 GRMILRVIDFLGLKRPDFPEFDIVHS 173
           GR    ++  LGL+  +  E   +H+
Sbjct: 186 GRAKEYIVKQLGLENGNAVEMGTIHA 211