Miyakogusa Predicted Gene

Lj6g3v1984420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1984420.2 tr|B9GJ67|B9GJ67_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_753597 PE=4
SV=1,27.45,0.00000000001, ,CUFF.60387.2
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29980.1                                                       237   8e-63
Glyma13g29980.2                                                       229   4e-60

>Glyma13g29980.1 
          Length = 177

 Score =  237 bits (605), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 119/176 (67%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 101 VDGTESYDEHDPDVIMIPQIINNLNGFSTKKCGQRISTLDSTPADSTFCPDRLLELPKEL 160
           +DG +S  EH  D IMI QIINNLN FSTK+CG RI TLDSTP D+ F PDR LE  K L
Sbjct: 1   MDGVDSNSEHGHDEIMIQQIINNLNDFSTKRCGLRIPTLDSTPTDNPFGPDRSLEGSKGL 60

Query: 161 EMKSIEALVVPSQLYLQNDYTGKNTVSKVIGQSGQSSFASRSDEGTKKADEMAQLQVIRR 220
           EM SIE L  P+QLY QNDY GKN V  + GQSGQ   AS S E   K +E+AQLQVIRR
Sbjct: 61  EMTSIETLNDPNQLYQQNDYMGKNRVFNMFGQSGQRFLAS-SSEHQDKGNEIAQLQVIRR 119

Query: 221 SLGRSLDIDKQMHPEALLFWNLWLDSEAERCYRKYKTYNCLMEAGVEVDCKNVAEL 276
           SLG++L  DK MHPEA LF NLWLDSEAERCYRKYKTY+CLMEAG++V+C  VAEL
Sbjct: 120 SLGKTLHFDKHMHPEASLFLNLWLDSEAERCYRKYKTYHCLMEAGLDVNCTTVAEL 175


>Glyma13g29980.2 
          Length = 175

 Score =  229 bits (583), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 117/176 (66%), Positives = 131/176 (74%), Gaps = 3/176 (1%)

Query: 101 VDGTESYDEHDPDVIMIPQIINNLNGFSTKKCGQRISTLDSTPADSTFCPDRLLELPKEL 160
           +DG +S  EH  D IMI QIINNLN FSTK+CG RI TLDSTP D+ F PDR LE  K L
Sbjct: 1   MDGVDSNSEHGHDEIMIQQIINNLNDFSTKRCGLRIPTLDSTPTDNPFGPDRSLEGSKGL 60

Query: 161 EMKSIEALVVPSQLYLQNDYTGKNTVSKVIGQSGQSSFASRSDEGTKKADEMAQLQVIRR 220
           EM SIE L  P+QLY QNDY GKN V  + GQSGQ   AS S E   K +E+A  QVIRR
Sbjct: 61  EMTSIETLNDPNQLYQQNDYMGKNRVFNMFGQSGQRFLAS-SSEHQDKGNEIA--QVIRR 117

Query: 221 SLGRSLDIDKQMHPEALLFWNLWLDSEAERCYRKYKTYNCLMEAGVEVDCKNVAEL 276
           SLG++L  DK MHPEA LF NLWLDSEAERCYRKYKTY+CLMEAG++V+C  VAEL
Sbjct: 118 SLGKTLHFDKHMHPEASLFLNLWLDSEAERCYRKYKTYHCLMEAGLDVNCTTVAEL 173