Miyakogusa Predicted Gene
- Lj6g3v1966510.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1966510.2 Non Chatacterized Hit- tr|J3L1H7|J3L1H7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,34.48,2e-18,zf-MYND,Zinc finger, MYND-type;
PDCD2_C,Programmed cell death protein 2, C-terminal; ZF_MYND_1,Zinc
,CUFF.60332.2
(208 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g09740.3 337 4e-93
Glyma09g09740.2 337 4e-93
Glyma09g09740.1 337 4e-93
Glyma12g07520.1 332 1e-91
Glyma09g09740.4 232 2e-61
Glyma11g15940.1 81 9e-16
>Glyma09g09740.3
Length = 314
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/208 (77%), Positives = 183/208 (87%), Gaps = 4/208 (1%)
Query: 1 MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
MLFVF+CPSM CLLRDQHEQWKRHPE+PSRSVKVFRCQLP +NPFYS ECP+ + SH+PA
Sbjct: 110 MLFVFMCPSMKCLLRDQHEQWKRHPEKPSRSVKVFRCQLPRINPFYSPECPQYNESHEPA 169
Query: 61 TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
SGAALCDWCGTWKGDKLCSSCRQ RYC EKHQ MSWR+GHK ACQQ+KVSS V GPNKS
Sbjct: 170 GSGAALCDWCGTWKGDKLCSSCRQARYCSEKHQAMSWRTGHKTACQQMKVSSPVFGPNKS 229
Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
TTSLES KVGS N+WPEFEI+IEDESEYNRDIS+ NS L++SLIS+N D++MN
Sbjct: 230 GTTSLESHKVGSKNLWPEFEISIEDESEYNRDISE--ENS--LANSLISRNRNDDTMNSL 285
Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
+D+F+GDD+KKSW SFQ+RIA+APEQVL
Sbjct: 286 MDNFKGDDDKKSWASFQERIAEAPEQVL 313
>Glyma09g09740.2
Length = 406
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/208 (77%), Positives = 183/208 (87%), Gaps = 4/208 (1%)
Query: 1 MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
MLFVF+CPSM CLLRDQHEQWKRHPE+PSRSVKVFRCQLP +NPFYS ECP+ + SH+PA
Sbjct: 110 MLFVFMCPSMKCLLRDQHEQWKRHPEKPSRSVKVFRCQLPRINPFYSPECPQYNESHEPA 169
Query: 61 TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
SGAALCDWCGTWKGDKLCSSCRQ RYC EKHQ MSWR+GHK ACQQ+KVSS V GPNKS
Sbjct: 170 GSGAALCDWCGTWKGDKLCSSCRQARYCSEKHQAMSWRTGHKTACQQMKVSSPVFGPNKS 229
Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
TTSLES KVGS N+WPEFEI+IEDESEYNRDIS+ NS L++SLIS+N D++MN
Sbjct: 230 GTTSLESHKVGSKNLWPEFEISIEDESEYNRDISE--ENS--LANSLISRNRNDDTMNSL 285
Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
+D+F+GDD+KKSW SFQ+RIA+APEQVL
Sbjct: 286 MDNFKGDDDKKSWASFQERIAEAPEQVL 313
>Glyma09g09740.1
Length = 406
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/208 (77%), Positives = 183/208 (87%), Gaps = 4/208 (1%)
Query: 1 MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
MLFVF+CPSM CLLRDQHEQWKRHPE+PSRSVKVFRCQLP +NPFYS ECP+ + SH+PA
Sbjct: 110 MLFVFMCPSMKCLLRDQHEQWKRHPEKPSRSVKVFRCQLPRINPFYSPECPQYNESHEPA 169
Query: 61 TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
SGAALCDWCGTWKGDKLCSSCRQ RYC EKHQ MSWR+GHK ACQQ+KVSS V GPNKS
Sbjct: 170 GSGAALCDWCGTWKGDKLCSSCRQARYCSEKHQAMSWRTGHKTACQQMKVSSPVFGPNKS 229
Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
TTSLES KVGS N+WPEFEI+IEDESEYNRDIS+ NS L++SLIS+N D++MN
Sbjct: 230 GTTSLESHKVGSKNLWPEFEISIEDESEYNRDISE--ENS--LANSLISRNRNDDTMNSL 285
Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
+D+F+GDD+KKSW SFQ+RIA+APEQVL
Sbjct: 286 MDNFKGDDDKKSWASFQERIAEAPEQVL 313
>Glyma12g07520.1
Length = 398
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/210 (76%), Positives = 179/210 (85%), Gaps = 8/210 (3%)
Query: 1 MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
MLFVF+CPSM CLLRDQHEQWKRHPE+PS+S+KVFRCQLP NPFYS ECP+ + SHKPA
Sbjct: 112 MLFVFMCPSMKCLLRDQHEQWKRHPEKPSKSLKVFRCQLPRANPFYSPECPQYNKSHKPA 171
Query: 61 TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
SGAALCDWCGTWKGDKLCS CRQ RYC EKHQVMSWR+GHKIACQQ+KVSS VSGPNKS
Sbjct: 172 GSGAALCDWCGTWKGDKLCSGCRQARYCSEKHQVMSWRTGHKIACQQMKVSSPVSGPNKS 231
Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISD--TLANSLRLSDSLISKNTADESMN 178
T SL+S KVGS N+WPEFEITIEDES+Y RD+S+ TLAN SLIS+N D++MN
Sbjct: 232 GTASLDSHKVGSKNLWPEFEITIEDESDYKRDMSEENTLAN------SLISRNRTDDTMN 285
Query: 179 LDLDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
LD+FQGDD+KKSW SFQ IAKAPEQVL
Sbjct: 286 SLLDNFQGDDDKKSWASFQQCIAKAPEQVL 315
>Glyma09g09740.4
Length = 259
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/129 (82%), Positives = 115/129 (89%)
Query: 1 MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
MLFVF+CPSM CLLRDQHEQWKRHPE+PSRSVKVFRCQLP +NPFYS ECP+ + SH+PA
Sbjct: 110 MLFVFMCPSMKCLLRDQHEQWKRHPEKPSRSVKVFRCQLPRINPFYSPECPQYNESHEPA 169
Query: 61 TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
SGAALCDWCGTWKGDKLCSSCRQ RYC EKHQ MSWR+GHK ACQQ+KVSS V GPNKS
Sbjct: 170 GSGAALCDWCGTWKGDKLCSSCRQARYCSEKHQAMSWRTGHKTACQQMKVSSPVFGPNKS 229
Query: 121 VTTSLESRK 129
TTSLES K
Sbjct: 230 GTTSLESHK 238
>Glyma11g15940.1
Length = 155
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 8/70 (11%)
Query: 141 ITIEDESEYNRDISD--TLANSLRLSDSLISKNTADESMNLDLDSFQGDDEKKSWVSFQD 198
ITIEDESEYNRD+S+ TLANSL IS+N ++MN LDSF+GDD+KKSW SF++
Sbjct: 5 ITIEDESEYNRDMSEENTLANSL------ISRNRTHDTMNSLLDSFEGDDDKKSWASFRE 58
Query: 199 RIAKAPEQVL 208
IAK PEQVL
Sbjct: 59 CIAKVPEQVL 68