Miyakogusa Predicted Gene

Lj6g3v1966490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1966490.1 tr|A9REZ7|A9REZ7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_113082,30,0.00000000000009,seg,NULL,CUFF.60330.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29480.1                                                       213   1e-55

>Glyma13g29480.1 
          Length = 209

 Score =  213 bits (541), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/212 (55%), Positives = 136/212 (64%), Gaps = 6/212 (2%)

Query: 1   MSTVRSNSTXXXXXXXXXXXTPSQSLSFSSYL---RYRNLFSLSHSLLTAVANLXXXXXX 57
           M+TVRSNS            T        S+    RYRNLFSLSHSLL  VANL      
Sbjct: 1   MATVRSNSITVFFVAFIILTTAPSPSQSLSFSSFFRYRNLFSLSHSLLIGVANLRAARGD 60

Query: 58  XXXXXXXXXXXXXXXKMSGIGFLRFLWSAWSWSWKDLSLTDLYGAVSDINELLRSLNEFT 117
                          + +  GFL+ LW+    SW D+S TDLYGAVSD+NELLR L E T
Sbjct: 61  VAGADRARSIADGLDQGTVFGFLKLLWT---LSWTDMSFTDLYGAVSDMNELLRGLTELT 117

Query: 118 RLESPAQTSAWLSRNYQKLLKVTKSLSRKLLNSFGQSKVVREIVETLQKEVVEGGLIRDC 177
           RLES A+ SAW+SRNYQ +L V KSLSRKLL + GQS V+REI ET QKEVVEGGLIRDC
Sbjct: 118 RLESVAERSAWVSRNYQSVLTVFKSLSRKLLKALGQSGVMREIGETFQKEVVEGGLIRDC 177

Query: 178 LQVGTKDLKALVQVLKDLILQFSPATDKDPDL 209
           L++G  DLKAL+Q++KDL+LQF P  DKD DL
Sbjct: 178 LELGNNDLKALIQIVKDLLLQFFPVRDKDHDL 209