Miyakogusa Predicted Gene

Lj6g3v1949670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1949670.1 Non Chatacterized Hit- tr|I1M6X4|I1M6X4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,56.6,0.0000004,
,CUFF.60278.1
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03210.1                                                        59   1e-09
Glyma02g45600.1                                                        54   5e-08

>Glyma14g03210.1 
          Length = 540

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)

Query: 1  MVSLTLADCILHHMYANSCYTTASKMKCYGFHLSYMSSKAPHQSFSLVLPNLT 53
          MV L LAD +L+ + ANSCY  A KMK YGFHL Y+SSK P Q  S   P++T
Sbjct: 5  MVLLRLADWVLYQLLANSCYRAARKMKSYGFHLGYLSSKPPLQPSS--FPSVT 55


>Glyma02g45600.1 
          Length = 539

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 1  MVSLTLADCILHHMYANSCYTTASKMKCYGFHLSYMSSKAPHQSFSLVLPNLT 53
          M  L LAD IL+ + ANSCY  A KMK YGFHL Y+SSK   Q  S   P++T
Sbjct: 5  MELLRLADWILYQLLANSCYRAARKMKSYGFHLGYLSSKPSLQPSS--FPSVT 55