Miyakogusa Predicted Gene

Lj6g3v1946570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946570.1 Non Chatacterized Hit- tr|K3YJT9|K3YJT9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014508,48.11,2e-18,OS02G0684300 PROTEIN,NULL;
UNCHARACTERIZED,NULL; Ndc1_Nup,Nucleoporin protein
Ndc1-Nup,CUFF.60273.1
         (349 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g09840.1                                                       595   e-170
Glyma13g29250.1                                                       555   e-158

>Glyma15g09840.1 
          Length = 494

 Score =  595 bits (1535), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 289/349 (82%), Positives = 315/349 (90%)

Query: 1   MGIPAAAKGSLKLSTVAFFFSAVLLDILPHSFKCSVATRAFFVEQIVFSFASFAVFLCWE 60
           MG+P++A+ +LKLS VA  FS +LL++LPH FK SVAT  FF EQI    A+F +F  WE
Sbjct: 146 MGVPSSARRALKLSIVASVFSGILLELLPHPFKYSVATGRFFTEQITSLAATFTIFFSWE 205

Query: 61  VTHHLHRVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLCMVCEN 120
           +THHLH VLHTKRSIFAPPKGSAAAETNPSEHLLSALEES+PTSLLRYLAYLDLCMVCEN
Sbjct: 206 LTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESSPTSLLRYLAYLDLCMVCEN 265

Query: 121 NVDTWRRAAFFEETGETYKRVIAVCLRPLEHLASRLGEGLGNSPDKPAQLSNQLLSPTDA 180
           NVDTWRRA FFEETGETYKRVIAVCL+PLEHLA++LGEGLGN  DK  QLSNQLLSPTDA
Sbjct: 266 NVDTWRRAGFFEETGETYKRVIAVCLKPLEHLATKLGEGLGNPVDKATQLSNQLLSPTDA 325

Query: 181 RLDLKNGEELYNFQLHACCSRIVASLTACSRKEDKFGVAQLSGSNAAVVSTLISCLLAVE 240
           R DLK+ EEL+NFQL+A CSR   SLTACSRK+DKFGVAQLSGSNAAVVSTL+SCLLAVE
Sbjct: 326 RPDLKHIEELHNFQLYAWCSRTAVSLTACSRKDDKFGVAQLSGSNAAVVSTLLSCLLAVE 385

Query: 241 NFMGKKTNLQSPNQLLGPAGIKWATANSGRVDVPAVKRRTGPVNPKAYAIADVLRTSIYQ 300
           +FMGKKTNLQSPNQLLGPAGIKWAT NSGRVDV A KRR+GPVN KAYAIADVL+TSIYQ
Sbjct: 386 SFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDVAAGKRRSGPVNSKAYAIADVLKTSIYQ 445

Query: 301 IVSAFHDEMLAGSKASLLEKDWITSGKPLFGTHEMLIQKLRLFLDFRAT 349
           IVSAFHDEMLAG+KASLLEKDW+T+GKPLFGT EMLIQKLRLFLDFRAT
Sbjct: 446 IVSAFHDEMLAGAKASLLEKDWVTNGKPLFGTREMLIQKLRLFLDFRAT 494


>Glyma13g29250.1 
          Length = 495

 Score =  555 bits (1429), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/350 (81%), Positives = 309/350 (88%), Gaps = 2/350 (0%)

Query: 1   MGIPAAAKGSLKLSTVAFFFSAVLLDILPHSFKCSVA-TRAFFVEQIVFSFASFAVFLCW 59
           MG+P+AA+ +LKLS VA  FS +LL++LPH F  SVA T  FF EQI    A+FA+F  W
Sbjct: 147 MGVPSAARRALKLSVVASIFSGILLELLPHPFNYSVAATGRFFTEQITSFAATFAIFFSW 206

Query: 60  EVTHHLHRVLHTKRSIFAPPKGSAAAETNPSEHLLSALEESNPTSLLRYLAYLDLCMVCE 119
           E+THHLH VLHTKR IFAPPKGSA AETNPSEHLLSALEESNPTSLL YLAYLDL MVCE
Sbjct: 207 ELTHHLHWVLHTKRFIFAPPKGSAVAETNPSEHLLSALEESNPTSLLLYLAYLDLFMVCE 266

Query: 120 NNVDTWRRAAFFEETGETYKRVIAVCLRPLEHLASRLGEGLGNSPDKPAQLSNQLLSPTD 179
           NNVDTWRRA FFEET ETYKRVIAVCL+PLEHLA++LGEGLGN  DK  QLSNQLLSPTD
Sbjct: 267 NNVDTWRRAGFFEETSETYKRVIAVCLKPLEHLATKLGEGLGNPVDKATQLSNQLLSPTD 326

Query: 180 ARLDLKNGEELYNFQLHACCSRIVASLTACSRKEDKFGVAQLSGSNAAVVSTLISCLLAV 239
           AR DLK+ EEL+NFQL+A CSR  ASLTACSRK+DKFGVAQLSGSNAAVVSTL+SCLLAV
Sbjct: 327 ARPDLKHIEELHNFQLYAWCSRTAASLTACSRKDDKFGVAQLSGSNAAVVSTLLSCLLAV 386

Query: 240 ENFMGKKTNLQSPNQLLGPAGIKWATANSGRVDVPAVKRRTGPVNPKAYAIADVLRTSIY 299
           ENFMGKKTNLQSPNQLLGPAGIKWAT NSGRVDV A  +R+GPVN KAYAIADVL+ SIY
Sbjct: 387 ENFMGKKTNLQSPNQLLGPAGIKWATVNSGRVDV-AAGKRSGPVNSKAYAIADVLKISIY 445

Query: 300 QIVSAFHDEMLAGSKASLLEKDWITSGKPLFGTHEMLIQKLRLFLDFRAT 349
           QIVSAFHDEMLAG+KASLLEKDW+T+GKPLFGT EMLIQKLRLFLDFRAT
Sbjct: 446 QIVSAFHDEMLAGAKASLLEKDWVTNGKPLFGTREMLIQKLRLFLDFRAT 495