Miyakogusa Predicted Gene
- Lj6g3v1946520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1946520.1 Non Chatacterized Hit- tr|B4FYI5|B4FYI5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,28.02,2e-18,BRCT,BRCT
domain; BRCT domain,BRCT domain; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.60261.1
(614 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g29220.1 839 0.0
Glyma15g09870.1 825 0.0
Glyma19g35010.1 358 7e-99
Glyma19g35010.3 337 2e-92
Glyma19g35010.2 273 6e-73
Glyma03g32260.2 64 4e-10
Glyma12g35580.1 56 1e-07
Glyma13g34850.1 55 3e-07
Glyma04g43310.1 52 3e-06
>Glyma13g29220.1
Length = 979
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/625 (68%), Positives = 481/625 (76%), Gaps = 35/625 (5%)
Query: 2 QEQIGEQQNAIDGVDVDPNMPLKVTMEQSSDNKHKSSNLGKSIRRGKTVCFNTSINPTPQ 61
QEQIGE +N+ D M ++VT EQ+ DN SSNLGK RRGK VCFNTS PTP
Sbjct: 378 QEQIGEPKNSFD------EMYVEVTQEQALDN---SSNLGKGSRRGKRVCFNTSPIPTPI 428
Query: 62 TTCTVSNNSGVLSDGELKMAKISRTSPSKQENEKHCPQELVGRHHLKRSGKQKLDYVQVL 121
T CTV N GV S GE+K AK P KQENEKH QE+ G+ +K SGKQ ++ +
Sbjct: 429 TACTVPNTLGVQSIGEMKKAKNIDILPCKQENEKHYAQEISGKSQMKISGKQNINQM--- 485
Query: 122 AEDLSSTQSPTNEFAGSDSS---LQMYSSEKAXXXXXXXXXXXXXXXXXXXXXXXXXXLK 178
NEFAGSDSS L+ ++ K K
Sbjct: 486 -----------NEFAGSDSSIFSLRTDNNGKDSNRRQCKSKYSRKTIYCSKELETTKRQK 534
Query: 179 LSSDCISKTKTGEEIQPNESILQGPDAGVLSETSKEKHRPLMDERILRRCESHVKKYQCV 238
LSS CISKTK EEI P ESI QGPD L++TSKEKH PLMD+ +LR+CE+ VK YQCV
Sbjct: 535 LSSACISKTKNNEEILPIESIHQGPDVRDLNDTSKEKHCPLMDQTVLRKCENLVKNYQCV 594
Query: 239 FCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLEAE 298
FCL SEESEASGPMVHY DG+PV +DYEGGSKV HCHR+CTEWAPNVYF+ D +INL+AE
Sbjct: 595 FCLSSEESEASGPMVHYLDGRPVTSDYEGGSKVTHCHRNCTEWAPNVYFDGDYSINLDAE 654
Query: 299 ISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASSKL 358
ISRSRRIKCSFCG KGAALGCYEKSCR+SFHVPCAKWTSQCRWD +NFVMLCPLHASS L
Sbjct: 655 ISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSQCRWDTQNFVMLCPLHASSML 714
Query: 359 PNESSGSQERSKKGTG-EGKSRGFKHDTKSQTRTAHGSYKKIILCCSALSMQEKDVVSEF 417
P E SGSQ+RSKK T EGK+ G KHDT SQ+R A+ SYKKI+LCCSALS+QE++VVSEF
Sbjct: 715 PCEGSGSQKRSKKCTASEGKAHGPKHDTTSQSRAAYLSYKKIVLCCSALSVQEREVVSEF 774
Query: 418 ERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWIKACMKEMEP 477
ER +K TVLKNWDSSVTH+IA+ DENGACRRTLKVLLGILEGKWILNI+WIKACMKEM P
Sbjct: 775 ERVSKATVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGP 834
Query: 478 VDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFMPSYKGFLQDIVIAA 537
+DEE YEIN+DIHGIRDGPRLGRLRVLNKQPKLF GYKFYFMGDF+PSYKG+LQ++V+AA
Sbjct: 835 IDEECYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYFMGDFIPSYKGYLQNLVVAA 894
Query: 538 GGLVLHRKPVLAD--------HPHQTLIIYSLELPNKCNPSEKDTIFSRRRSDAEVLASS 589
GG++LHRKPV D H +QTLIIYSLELP+KC PS+KDTI S+RR DAEVLASS
Sbjct: 895 GGIILHRKPVSGDQESTSPDMHTYQTLIIYSLELPDKCKPSKKDTICSQRRHDAEVLASS 954
Query: 590 TGSKVASNTWILNSIAACKLQCLAQ 614
TGS VASNTW+LNSIAACKLQ LAQ
Sbjct: 955 TGSNVASNTWVLNSIAACKLQYLAQ 979
>Glyma15g09870.1
Length = 950
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/625 (67%), Positives = 466/625 (74%), Gaps = 51/625 (8%)
Query: 2 QEQIGEQQNAIDGVDVDPNMPLKVTMEQSSDNKHKSSNLGKSIRRGKTVCFNTSINPTPQ 61
QE IGE +N+ID + VD + L+VT EQ+ D KSSN K RR K VCFNTS PTP
Sbjct: 365 QEHIGEPKNSIDEMHVDSYISLEVTQEQALD---KSSNPRKDSRRDKRVCFNTSTIPTPI 421
Query: 62 TTCTVSNNSGVLSDGELKMAKISRTSPSKQENEKHCPQELVGRHHLKRSGKQKLDYVQVL 121
T CTV N GV S GE+K AK + SP KQENEKH QE+ G+ +KRSGKQ +
Sbjct: 422 TACTVPNTLGVQSIGEMKKAKNTDISPLKQENEKHHAQEISGKSRMKRSGKQNV------ 475
Query: 122 AEDLSSTQSPTNEFAGSDSS---LQMYSSEKAXXXXXXXXXXXXXXXXXXXXXXXXXXLK 178
S TNEFAGSDSS LQ ++ K K
Sbjct: 476 --------SQTNEFAGSDSSIFSLQTDNNGKDSNSRQCKSKYSRKSMSCSKELKATKRQK 527
Query: 179 LSSDCISKTKTGEEIQPNESILQGPDAGVLSETSKEKHRPLMDERILRRCESHVKKYQCV 238
LSSDCISKTK EEI P ESI Q LR+CESHV KYQC+
Sbjct: 528 LSSDCISKTKNVEEILPIESIHQA----------------------LRKCESHVTKYQCI 565
Query: 239 FCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLEAE 298
FCL SEESE SGPMVHY DG+PV ADYEGGSKV HCHR+CTEWAPNVYF+ DNAINLEAE
Sbjct: 566 FCLSSEESETSGPMVHYLDGRPVTADYEGGSKVTHCHRNCTEWAPNVYFDGDNAINLEAE 625
Query: 299 ISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASSKL 358
ISRSRRIKCSFCG KGAALGCYEKSCR+SFHVPCA WTSQCRWD +NFVMLCPLHASS L
Sbjct: 626 ISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCANWTSQCRWDTQNFVMLCPLHASSML 685
Query: 359 PNESSGSQERSKK-GTGEGKSRGFKHDTKSQTRTAHGSYKKIILCCSALSMQEKDVVSEF 417
P E SGSQ+RSKK EGK+ G KHDT +Q+R AH SYKKI+LCCSALS+QE++VVSEF
Sbjct: 686 PCEGSGSQKRSKKCAASEGKNHGLKHDTTNQSRAAHRSYKKIVLCCSALSVQEREVVSEF 745
Query: 418 ERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWIKACMKEMEP 477
ER +K VLKNWDSSVTH+IA+ DENGACRRTLKVLLGILEGKWILNI+WIKACMKEM P
Sbjct: 746 ERVSKAAVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGP 805
Query: 478 VDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFMPSYKGFLQDIVIAA 537
VDEE YEIN+DIHGIRDGPRLGRLRVLNKQPKLF GYKFY MGDF+PSYKG+LQD+++AA
Sbjct: 806 VDEERYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYVMGDFIPSYKGYLQDLLVAA 865
Query: 538 GGLVLHRKPVLAD--------HPHQTLIIYSLELPNKCNPSEKDTIFSRRRSDAEVLASS 589
GG++LHRKPV D HP+QTLIIYSLELP+KC P +KDTI S+RR DAEVLASS
Sbjct: 866 GGIILHRKPVSGDQESTSPDTHPYQTLIIYSLELPDKCKPLKKDTICSQRRHDAEVLASS 925
Query: 590 TGSKVASNTWILNSIAACKLQCLAQ 614
TGSKVASNTWILNSIAACKL+CLAQ
Sbjct: 926 TGSKVASNTWILNSIAACKLKCLAQ 950
>Glyma19g35010.1
Length = 675
Score = 358 bits (920), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 185/389 (47%), Positives = 247/389 (63%), Gaps = 26/389 (6%)
Query: 237 CVFCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLE 296
C FC S+ SEA+GPM+HY +G V D VI HR C +WAP VYF + NL+
Sbjct: 294 CSFCQSSKISEATGPMLHYANGNLVTGDAAMKPNVIPVHRICIDWAPQVYFVGEVVKNLK 353
Query: 297 AEISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASS 356
AE++R ++KCS C KGAALGCY KSCR+++HVPCA S CRWD E+F++LCP+H++
Sbjct: 354 AEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHVPCAMDISDCRWDHEDFLLLCPVHSNV 413
Query: 357 KLPNESSGSQERSKKGTGEGKSRGFKHDTKSQTRTAHG--------SYKKIILCCSALSM 408
K P E + RSKK + KH T S + H + KK++ C SALS
Sbjct: 414 KFPCE----KIRSKKKATQ------KHPTFSHLPSHHSNRLEASQDASKKLVFCGSALSN 463
Query: 409 QEKDVVSEFERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWI 468
+EK + + TV K W S+VTH+IAA D +GAC RTLKVL+ IL G+W+L +DWI
Sbjct: 464 EEKVFLINYASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKVLMAILNGRWVLKMDWI 523
Query: 469 KACMKEMEPVDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFMPSYKG 528
KACM+E+ PV+EE YEINLD G + GP+ GRLR L +PKLF G KFYF GD++ +YK
Sbjct: 524 KACMQEINPVEEEPYEINLDNQGCQGGPKAGRLRALANEPKLFSGLKFYFSGDYVSTYKE 583
Query: 529 FLQDIVIAAGGLVLHRKPVLADHPHQ-------TLIIYSLELPNKCNPSEKDTIFSRRRS 581
L++++ GG VL K L H H+ L++Y+L+ P C E+ +I +R +
Sbjct: 584 DLEELIEVGGGTVLRIKEELEAHRHECKGDSSKLLVVYNLDPPQGCKLGEEVSILWQRLN 643
Query: 582 DAEVLASSTGSKVASNTWILNSIAACKLQ 610
DAE LA++T +V +TWIL SIAACKLQ
Sbjct: 644 DAEDLAANT-LQVIGHTWILESIAACKLQ 671
>Glyma19g35010.3
Length = 660
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/369 (46%), Positives = 232/369 (62%), Gaps = 25/369 (6%)
Query: 237 CVFCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLE 296
C FC S+ SEA+GPM+HY +G V D VI HR C +WAP VYF + NL+
Sbjct: 294 CSFCQSSKISEATGPMLHYANGNLVTGDAAMKPNVIPVHRICIDWAPQVYFVGEVVKNLK 353
Query: 297 AEISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASS 356
AE++R ++KCS C KGAALGCY KSCR+++HVPCA S CRWD E+F++LCP+H++
Sbjct: 354 AEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHVPCAMDISDCRWDHEDFLLLCPVHSNV 413
Query: 357 KLPNESSGSQERSKKGTGEGKSRGFKHDTKSQTRTAHG--------SYKKIILCCSALSM 408
K P E + RSKK + KH T S + H + KK++ C SALS
Sbjct: 414 KFPCE----KIRSKKKATQ------KHPTFSHLPSHHSNRLEASQDASKKLVFCGSALSN 463
Query: 409 QEKDVVSEFERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWI 468
+EK + + TV K W S+VTH+IAA D +GAC RTLKVL+ IL G+W+L +DWI
Sbjct: 464 EEKVFLINYASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKVLMAILNGRWVLKMDWI 523
Query: 469 KACMKEMEPVDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFMPSYKG 528
KACM+E+ PV+EE YEINLD G + GP+ GRLR L +PKLF G KFYF GD++ +YK
Sbjct: 524 KACMQEINPVEEEPYEINLDNQGCQGGPKAGRLRALANEPKLFSGLKFYFSGDYVSTYKE 583
Query: 529 FLQDIVIAAGGLVLHRKPVLADHPHQ-------TLIIYSLELPNKCNPSEKDTIFSRRRS 581
L++++ GG VL K L H H+ L++Y+L+ P C E+ +I +R +
Sbjct: 584 DLEELIEVGGGTVLRIKEELEAHRHECKGDSSKLLVVYNLDPPQGCKLGEEVSILWQRLN 643
Query: 582 DAEVLASST 590
DAE LA++T
Sbjct: 644 DAEDLAANT 652
>Glyma19g35010.2
Length = 572
Score = 273 bits (697), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 177/276 (64%), Gaps = 18/276 (6%)
Query: 237 CVFCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLE 296
C FC S+ SEA+GPM+HY +G V D VI HR C +WAP VYF + NL+
Sbjct: 294 CSFCQSSKISEATGPMLHYANGNLVTGDAAMKPNVIPVHRICIDWAPQVYFVGEVVKNLK 353
Query: 297 AEISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASS 356
AE++R ++KCS C KGAALGCY KSCR+++HVPCA S CRWD E+F++LCP+H++
Sbjct: 354 AEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHVPCAMDISDCRWDHEDFLLLCPVHSNV 413
Query: 357 KLPNESSGSQERSKKGTGEGKSRGFKHDTKSQTRTAHG--------SYKKIILCCSALSM 408
K P E + RSKK + KH T S + H + KK++ C SALS
Sbjct: 414 KFPCE----KIRSKKKATQ------KHPTFSHLPSHHSNRLEASQDASKKLVFCGSALSN 463
Query: 409 QEKDVVSEFERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWI 468
+EK + + TV K W S+VTH+IAA D +GAC RTLKVL+ IL G+W+L +DWI
Sbjct: 464 EEKVFLINYASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKVLMAILNGRWVLKMDWI 523
Query: 469 KACMKEMEPVDEESYEINLDIHGIRDGPRLGRLRVL 504
KACM+E+ PV+EE YEINLD G + GP+ GRLR L
Sbjct: 524 KACMQEINPVEEEPYEINLDNQGCQGGPKAGRLRAL 559
>Glyma03g32260.2
Length = 150
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Query: 420 ATKV--TVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWIK 469
A+KV TV K W S+VTH+IAA D +GAC RTLKVL+ IL G+W+L +D+++
Sbjct: 10 ASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKVLMAILNGRWVLKMDYLE 61
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 529 FLQDIVIAAGGLVLHRKPVLADHPH-------QTLIIYSLELPNKCNPSEKDTIFSRRRS 581
+L++++ GG VL K L H Q LI+Y+L+ P C E+ +I +R +
Sbjct: 59 YLEELIEVGGGTVLRSKEELESQRHECKGDSSQLLIVYNLDPPQGCKLGEEVSILWQRLN 118
Query: 582 DAEVLASSTGSKVASNTWILNSIAACKLQ 610
DAE LA++T +V +TWIL SIAACKLQ
Sbjct: 119 DAEDLAANT-LQVIGHTWILESIAACKLQ 146
>Glyma12g35580.1
Length = 1610
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 256 FDGKPV-------PADYEGGSKVIHCHRSCTEWAPNVYFEDDNAI-NLEAEISRSRRIKC 307
FD +P P + G I H C W+P VYF + + N+ A + R R +KC
Sbjct: 308 FDDEPAWLGRLLGPINDHCGIARIWVHLHCAVWSPEVYFANFGCLKNVRAALFRGRALKC 367
Query: 308 SFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLH 353
+ CG +GA GC PCA+ S C +D F++ C H
Sbjct: 368 TRCGRRGATTGCR----------PCAR-ASGCIFDHRKFLIACTDH 402
>Glyma13g34850.1
Length = 1788
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 262 PADYEGGSKVIHCHRSCTEWAPNVYFEDDNAI-NLEAEISRSRRIKCSFCGTKGAALGCY 320
P + G I H C W+P VYF + + N A + R R +KC+ CG +GA GC
Sbjct: 411 PINDHCGIARIWVHLHCAVWSPEVYFANFGCLKNARAALFRGRALKCTRCGRRGATTGCR 470
Query: 321 EKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLH 353
PCA+ S C +D F++ C H
Sbjct: 471 ----------PCAR-ASGCIFDHRKFLIACTDH 492
>Glyma04g43310.1
Length = 1404
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 259 KPVPADYEGGSKVIHCHRSCTEWAPNVYFED----DNAINLEAEISRSR-RIKCSFCGTK 313
KPV + EG V H C+ W P VY +D + +N+ EI +R ++ CS C K
Sbjct: 339 KPVNSSAEGVGSVPFVHLFCSLWMPEVYIDDLKKMEPVMNV-GEIKETRKKLVCSVCKAK 397
Query: 314 -GAALGCYEKSCRKSFHVPCAK 334
GA + C SCR SFH CA+
Sbjct: 398 CGACVRCSHGSCRASFHPLCAR 419