Miyakogusa Predicted Gene

Lj6g3v1946380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946380.1 Non Chatacterized Hit- tr|D8QXH8|D8QXH8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,52.81,3e-19,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
LSM,Ribonucleoprotein LSM domain; no description,NUL,CUFF.60256.1
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29110.1                                                       149   5e-37

>Glyma13g29110.1 
          Length = 94

 Score =  149 bits (377), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 75/79 (94%)

Query: 33  MLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQRCLGLILIPSSCRAT 92
           MLVGIKDGRFFLG FYCIDKQGNIILQDAVEYRSTR+SSPSPMEQRCLGLILIPSSCR +
Sbjct: 13  MLVGIKDGRFFLGSFYCIDKQGNIILQDAVEYRSTRQSSPSPMEQRCLGLILIPSSCRTS 72

Query: 93  CHVDCSIDEQLSLLSLRET 111
           CHVDC+I EQLSLLSL +T
Sbjct: 73  CHVDCAIHEQLSLLSLNQT 91