Miyakogusa Predicted Gene

Lj6g3v1946320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946320.1 tr|I3WTA4|I3WTA4_NICAT Jasmonate ZIM domain
protein f OS=Nicotiana attenuata PE=2 SV=1,44.37,3e-19,TIFY,Tify;
seg,NULL; no description,Tify; tify,Tify; CCT_2,CO/COL/TOC1, conserved
site,CUFF.60244.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g09980.1                                                       171   2e-43
Glyma13g29070.1                                                       159   9e-40
Glyma08g10220.1                                                       145   9e-36
Glyma05g27280.1                                                       139   6e-34

>Glyma15g09980.1 
          Length = 133

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/139 (64%), Positives = 108/139 (77%), Gaps = 13/139 (9%)

Query: 1   MRRNCNLELRLFPXXXXXXXXXXXXPMV-----EESSKSPMQNYFQQQENQRPLTIFYEG 55
           MRRNCNLEL LFP            PMV     E S  SPMQN F +QE Q+PLTIFY+G
Sbjct: 1   MRRNCNLELALFPPSDSGP------PMVDNVEEEASEISPMQNLFHRQEQQQPLTIFYDG 54

Query: 56  KICVADVTEHQAKSILMLAHKKVEEEIRMRTPTGAEPSTPTIVQSPHHVHSPGTGLSMKR 115
           KICVADVTE QAKSILMLA++K+EE  R+RTPTG+EPS+PT++QS + ++SPGTG SM++
Sbjct: 55  KICVADVTELQAKSILMLANRKLEE--RVRTPTGSEPSSPTVMQSNNQLYSPGTGPSMRK 112

Query: 116 SLQQFLQKRKTRVQEASPY 134
           SLQ+FLQKR+ RVQEASPY
Sbjct: 113 SLQRFLQKRRNRVQEASPY 131


>Glyma13g29070.1 
          Length = 138

 Score =  159 bits (402), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 86/141 (60%), Positives = 106/141 (75%), Gaps = 10/141 (7%)

Query: 1   MRRNCNLELRLFPXXXXXXXXXXXXPMVEESSK-SPMQNYFQQQENQR-----PLTIFYE 54
           MRRNCNLEL LF              MVEE+S+ SP+QN+F     Q      PLTIFY+
Sbjct: 1   MRRNCNLELALF--LPSDSGPRHHHSMVEEASEISPIQNFFHHHHRQEQQQQQPLTIFYD 58

Query: 55  GKICVADVTEHQAKSILMLAHKKVEEEIRMRTPTGAEPSTPTIVQSPHHVHSPGTGLSMK 114
           G ICVADVTE QAKSIL+LA++K+EE  R+RTPTG+EPS+P ++QS + ++SPGTGLSM+
Sbjct: 59  GNICVADVTELQAKSILLLANRKLEE--RVRTPTGSEPSSPAVMQSNNQLYSPGTGLSMR 116

Query: 115 RSLQQFLQKRKTRVQEASPYH 135
           +SLQ+FLQKRK RVQEASPYH
Sbjct: 117 KSLQRFLQKRKNRVQEASPYH 137


>Glyma08g10220.1 
          Length = 150

 Score =  145 bits (367), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 82/141 (58%), Positives = 102/141 (72%), Gaps = 13/141 (9%)

Query: 1   MRRNCNLELRLFPXXXXXXXXXXXXPMVEE------SSKSPMQNYFQQQENQRPLTIFYE 54
           MR+NCNLELRLFP            PM+E         +       QQ + Q PLTIFY+
Sbjct: 1   MRKNCNLELRLFPPSLSDLR-----PMMEAEVSERPQQQVAHHQQQQQPQPQHPLTIFYD 55

Query: 55  GKICVADVTEHQAKSILMLAHKKVEEEIRMRTPTGAEPSTPTIVQSPHHVHSPGTGLSMK 114
           GKI V+DVTE QA+SILMLA+K++E+  R+ TPTG+EPS+P ++QSPH+++SPGTGLSMK
Sbjct: 56  GKISVSDVTELQARSILMLANKEMEK--RVMTPTGSEPSSPILLQSPHNMYSPGTGLSMK 113

Query: 115 RSLQQFLQKRKTRVQEASPYH 135
           RSLQ+FLQKRK RVQE SPYH
Sbjct: 114 RSLQRFLQKRKNRVQETSPYH 134


>Glyma05g27280.1 
          Length = 134

 Score =  139 bits (351), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 104/140 (74%), Gaps = 12/140 (8%)

Query: 1   MRRNCNLELRLFPXXXXXXXXXXXXPMVE----ESSKSPMQNYFQQQENQRPLTIFYEGK 56
           MR+NC LELRLFP            PM+E    +S +    ++ QQQ+ Q PLTIFY+GK
Sbjct: 1   MRKNCKLELRLFPPSLSDLR-----PMMEAEVSDSPQQQDPHHQQQQQLQHPLTIFYDGK 55

Query: 57  ICVADVTEHQAKSILMLAHKKVEEEIRMRTPTGAEPSTPTIVQSPH-HVHSPGTGLSMKR 115
           ICV+DVTE QA+SILMLA+K  E E R+ TPTG+EPS+P ++QSPH +++SP TGLSMKR
Sbjct: 56  ICVSDVTELQARSILMLANK--ETERRVMTPTGSEPSSPILLQSPHNNMYSPSTGLSMKR 113

Query: 116 SLQQFLQKRKTRVQEASPYH 135
           SLQ+FLQKRK RVQE SPYH
Sbjct: 114 SLQRFLQKRKNRVQETSPYH 133