Miyakogusa Predicted Gene

Lj6g3v1946300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946300.1 Non Chatacterized Hit- tr|Q6N6P4|Q6N6P4_RHOPA
Putative uncharacterized protein (Precursor)
OS=Rhodop,32.18,8e-19,seg,NULL; DUF1365,Protein of unknown function
DUF1365,CUFF.60246.1
         (316 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29060.1                                                       492   e-139
Glyma15g09990.1                                                       454   e-128
Glyma08g40470.1                                                        89   4e-18

>Glyma13g29060.1 
          Length = 318

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 237/294 (80%), Positives = 256/294 (87%), Gaps = 2/294 (0%)

Query: 25  PFQALLRRLGTSRAASSSTNGGAEPISLYEGTVWHQRRHPVIHSFKYQVRYALIDLDRES 84
           PF  LL+R  +SRAASS ++  AEPISLYEGTVWHQRRHPV HSF+YQVRYALIDLDR  
Sbjct: 25  PFHTLLQRWNSSRAASSFSDDEAEPISLYEGTVWHQRRHPVNHSFQYQVRYALIDLDRAP 84

Query: 85  HAPPGHISSDEARQLTDTDGPILLLTIPPSVGYEQNPLSVYYCYDVEGSSTRLKKCIAEV 144
           HAP  H+S DEARQ+TDT+GPILLLTIPPSVGYEQNPLSVYYCY VEGS+ RLKKCIAEV
Sbjct: 85  HAPHDHLSLDEARQITDTNGPILLLTIPPSVGYEQNPLSVYYCYAVEGSTKRLKKCIAEV 144

Query: 145 TNTPWGERVSFIFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLSISISVHHPEHGN 204
           TNTPWGERVSF+FNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENL+ISISVHHPEHGN
Sbjct: 145 TNTPWGERVSFVFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLTISISVHHPEHGN 204

Query: 205 YFTXXXXXXXXXXXXEPDHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYATPTYK 264
           YFT            E DHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRY+ PTYK
Sbjct: 205 YFTASLKAKKLCSSPESDHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYSIPTYK 264

Query: 265 EEALIRDKKLQCCGFSDDTR-HLQEGGSD-QVCLAEVSPRNRRFKWTDAEWPWS 316
           +EAL+RDKKLQCCG SDD R HLQ+ GSD   CLAE+SP+NR F+W DA+WPWS
Sbjct: 265 DEALMRDKKLQCCGLSDDNRQHLQQRGSDPGCCLAELSPQNRWFRWRDAKWPWS 318


>Glyma15g09990.1 
          Length = 300

 Score =  454 bits (1168), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/291 (75%), Positives = 237/291 (81%), Gaps = 16/291 (5%)

Query: 26  FQALLRRLGTSRAASSSTNGGAEPISLYEGTVWHQRRHPVIHSFKYQVRYALIDLDRESH 85
           F ALLRR  +SRAASS +N  AEPISLYEGTVWHQRRHPV HSF+Y+VRYALIDLDR   
Sbjct: 26  FHALLRRRNSSRAASSFSNIEAEPISLYEGTVWHQRRHPVNHSFQYRVRYALIDLDRAPR 85

Query: 86  APPGHISSDEARQLTDTDGPILLLTIPPSVGYEQNPLSVYYCYDVEGSSTRLKKCIAEVT 145
            P  H+S D+ARQ+TDT+GPILLLTIPPSVGYEQNPLSVYYCY VEGS+  LKKCIAEVT
Sbjct: 86  EPHDHLSPDKARQITDTNGPILLLTIPPSVGYEQNPLSVYYCYAVEGSTKWLKKCIAEVT 145

Query: 146 NTPWGERVSFIFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLSISISVHHPEHGNY 205
           NTPWGERVSF+FNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENL+ISISVHHPEHGNY
Sbjct: 146 NTPWGERVSFLFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLTISISVHHPEHGNY 205

Query: 206 FTXXXXXXXXXXXXEPDHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYATPTYKE 265
           F             E DHAVFFWLMPHKVAVWIYW AIKLWWKNVRFVQHPRY  P+YK+
Sbjct: 206 FAASLKARKLCSSPESDHAVFFWLMPHKVAVWIYWQAIKLWWKNVRFVQHPRYNIPSYKD 265

Query: 266 EALIRDKKLQCCGFSDDTRHLQEGGSDQVCLAEVSPRNRRFKWTDAEWPWS 316
           EAL+RD KLQCCG                CLAE SP+NR F+W DA+WPWS
Sbjct: 266 EALMRDNKLQCCG----------------CLAEASPQNRWFRWRDAKWPWS 300


>Glyma08g40470.1 
          Length = 94

 Score = 89.4 bits (220), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 43/47 (91%)

Query: 128 YDVEGSSTRLKKCIAEVTNTPWGERVSFIFNPHSDLVAKALHVSPFM 174
           Y ++GS+ RLKKCIAEVTN PWGERVSF+F+PHSDLVAKALHV PFM
Sbjct: 1   YIIKGSTKRLKKCIAEVTNAPWGERVSFVFDPHSDLVAKALHVCPFM 47