Miyakogusa Predicted Gene

Lj6g3v1918200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1918200.1 tr|G7LE23|G7LE23_MEDTR 30S ribosomal protein S5
OS=Medicago truncatula GN=MTR_8g093680 PE=3 SV=1,78.93,0,seg,NULL; 30S
RIBOSOMAL PROTEIN S5,NULL; RIBOSOMAL S SUBUNIT,Ribosomal protein S5;
Ribosomal protein,CUFF.60181.1
         (500 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g08460.2                                                       589   e-168
Glyma04g08460.1                                                       589   e-168
Glyma06g08570.1                                                       451   e-127
Glyma07g31830.1                                                        83   6e-16
Glyma13g24640.1                                                        82   1e-15

>Glyma04g08460.2 
          Length = 497

 Score =  589 bits (1519), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 323/504 (64%), Positives = 367/504 (72%), Gaps = 11/504 (2%)

Query: 1   MGYLRYGGQTFRQILRCKSAGNVVRNSVRSQLGCEGAALSWYYSPFARKTLYSTSSDARI 60
           MGY+ +G    R ILR ++A  VV NS RSQ      A    +SP     L+ ++ D + 
Sbjct: 1   MGYIHHGRTGLRHILRFRTATGVVSNSGRSQ----SRAAFPSHSPILGNVLFFSTGD-KY 55

Query: 61  VQDLLAQVEKDRLREKNERMRAGLDTADIDAECEEDYMGVGPLIXXXXXXXXXXCPELMR 120
           + ++ A+VE+DR RE+NER+R GLDTADID E E+DYMGVGPLI           PEL R
Sbjct: 56  LNEITAEVERDRRRERNERLRLGLDTADIDTESEQDYMGVGPLIAKLEKEMLKESPELNR 115

Query: 121 XXXXXXXXXXXXXXXXXQXXXXXX--XXXXXXHQDLLKNFTDADTLDDAFKWMNRIDKFE 178
                            +              H DLLKNF +A+TLDDAFK M +ID FE
Sbjct: 116 YEEPTDSDDDSDEETKDEADKKMSDFEKKRDKHTDLLKNFIEAETLDDAFKCMTKIDNFE 175

Query: 179 NKHFRLRPEYRVIGELINRLKVVTDQKDKFILQNKLNRALRLVQWKEAFDPDNPDNYGVI 238
           NKHFRLR EYRVIGEL+NRLKV T+ KDKF+LQNKLNRALRLV+WKEA+DPDNP NYGVI
Sbjct: 176 NKHFRLRSEYRVIGELMNRLKVSTELKDKFVLQNKLNRALRLVRWKEAYDPDNPANYGVI 235

Query: 239 QHEQLGPTADALQHAGFEKEK--QTIXXXXXXXXXXXXXXXXXXXXXXNIILAKLDAIDX 296
           Q EQ  PTADA + A FEKEK  Q                        N+++AKL+AID 
Sbjct: 236 QREQ--PTADAKEEAEFEKEKQKQIEEGDNADADDDDEQEFDDMKEKDNVLMAKLEAIDR 293

Query: 297 XXXXXXXXXXYTFGKKGKVLEEEIRDLAEERNELTEKKRRPLYRKGFDVKLINVNRTCKV 356
                     YTFG+KGK LEEEI+DLAEERNELTE+KR+PLYRKGFD +LI++NRTCKV
Sbjct: 294 KLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEQKRKPLYRKGFDTRLIDMNRTCKV 353

Query: 357 TKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERHEEHTIAH 416
           TKGGQVVKYTAM+ACGNYNGV+GFAKAKGPAVPVALQKAYEKCFQNLH+VERHEEHTIAH
Sbjct: 354 TKGGQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAH 413

Query: 417 AIQTSYKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGSRNPHNTVKAVFKA 476
           A+QTSYKKTKVYLWPAPT TGMKAGR V+ ILHLAG KNVKSKV+GSRNPHNTVKAVFKA
Sbjct: 414 AVQTSYKKTKVYLWPAPTTTGMKAGRSVEAILHLAGLKNVKSKVIGSRNPHNTVKAVFKA 473

Query: 477 LNAIETPRDVQEKFGRTVVEKYLL 500
           LNAIETPRDVQEKFGRTVVEKYLL
Sbjct: 474 LNAIETPRDVQEKFGRTVVEKYLL 497


>Glyma04g08460.1 
          Length = 497

 Score =  589 bits (1519), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 323/504 (64%), Positives = 367/504 (72%), Gaps = 11/504 (2%)

Query: 1   MGYLRYGGQTFRQILRCKSAGNVVRNSVRSQLGCEGAALSWYYSPFARKTLYSTSSDARI 60
           MGY+ +G    R ILR ++A  VV NS RSQ      A    +SP     L+ ++ D + 
Sbjct: 1   MGYIHHGRTGLRHILRFRTATGVVSNSGRSQ----SRAAFPSHSPILGNVLFFSTGD-KY 55

Query: 61  VQDLLAQVEKDRLREKNERMRAGLDTADIDAECEEDYMGVGPLIXXXXXXXXXXCPELMR 120
           + ++ A+VE+DR RE+NER+R GLDTADID E E+DYMGVGPLI           PEL R
Sbjct: 56  LNEITAEVERDRRRERNERLRLGLDTADIDTESEQDYMGVGPLIAKLEKEMLKESPELNR 115

Query: 121 XXXXXXXXXXXXXXXXXQXXXXXX--XXXXXXHQDLLKNFTDADTLDDAFKWMNRIDKFE 178
                            +              H DLLKNF +A+TLDDAFK M +ID FE
Sbjct: 116 YEEPTDSDDDSDEETKDEADKKMSDFEKKRDKHTDLLKNFIEAETLDDAFKCMTKIDNFE 175

Query: 179 NKHFRLRPEYRVIGELINRLKVVTDQKDKFILQNKLNRALRLVQWKEAFDPDNPDNYGVI 238
           NKHFRLR EYRVIGEL+NRLKV T+ KDKF+LQNKLNRALRLV+WKEA+DPDNP NYGVI
Sbjct: 176 NKHFRLRSEYRVIGELMNRLKVSTELKDKFVLQNKLNRALRLVRWKEAYDPDNPANYGVI 235

Query: 239 QHEQLGPTADALQHAGFEKEK--QTIXXXXXXXXXXXXXXXXXXXXXXNIILAKLDAIDX 296
           Q EQ  PTADA + A FEKEK  Q                        N+++AKL+AID 
Sbjct: 236 QREQ--PTADAKEEAEFEKEKQKQIEEGDNADADDDDEQEFDDMKEKDNVLMAKLEAIDR 293

Query: 297 XXXXXXXXXXYTFGKKGKVLEEEIRDLAEERNELTEKKRRPLYRKGFDVKLINVNRTCKV 356
                     YTFG+KGK LEEEI+DLAEERNELTE+KR+PLYRKGFD +LI++NRTCKV
Sbjct: 294 KLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEQKRKPLYRKGFDTRLIDMNRTCKV 353

Query: 357 TKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERHEEHTIAH 416
           TKGGQVVKYTAM+ACGNYNGV+GFAKAKGPAVPVALQKAYEKCFQNLH+VERHEEHTIAH
Sbjct: 354 TKGGQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAH 413

Query: 417 AIQTSYKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGSRNPHNTVKAVFKA 476
           A+QTSYKKTKVYLWPAPT TGMKAGR V+ ILHLAG KNVKSKV+GSRNPHNTVKAVFKA
Sbjct: 414 AVQTSYKKTKVYLWPAPTTTGMKAGRSVEAILHLAGLKNVKSKVIGSRNPHNTVKAVFKA 473

Query: 477 LNAIETPRDVQEKFGRTVVEKYLL 500
           LNAIETPRDVQEKFGRTVVEKYLL
Sbjct: 474 LNAIETPRDVQEKFGRTVVEKYLL 497


>Glyma06g08570.1 
          Length = 442

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/501 (51%), Positives = 313/501 (62%), Gaps = 60/501 (11%)

Query: 1   MGYLRYGGQTFRQILRCKSAGNVVRNSVRSQLGCEGAALSWYYSPFARKTLYSTSSDARI 60
           MGY+ +G    R + R ++A  VV+NS RSQL     A   + SP     +   S+  + 
Sbjct: 1   MGYIHHGRTGLRHLFRFRTATGVVKNSARSQLRT---AFLSHSSPILGNNVVFFSTGDKF 57

Query: 61  VQDLLAQVEKDRLREKNERMRAGLDTADIDAECEEDYMGVGPLIXXXXXXXXXXCPELMR 120
           + ++ A+VEKDR RE+NER+R GLDTADIDAE E+DYMGVGPLI            EL R
Sbjct: 58  LHEITAEVEKDRRRERNERLRLGLDTADIDAESEQDYMGVGPLIAKLEKEMLKESAELNR 117

Query: 121 XXXXXXXXXXXXXXXXXQXXXXXXXXXXXXHQDLLKNFTDADTLDDAFKWMNRIDKFENK 180
                                              ++ +D +T+DDA K ++  +K ++K
Sbjct: 118 YEEPTDS----------------------------EDDSDEETMDDADKKVSDFEKKKDK 149

Query: 181 HFRLRPEYRVIGELINRLKVVTDQKDKFILQNKLNRALRLVQWKEAFDPDNPDNYGV-IQ 239
           H                     D  DKF     L+ A +   W    D     ++ +  +
Sbjct: 150 HM--------------------DLLDKFTSAETLDDAFK---WMAKIDNFENKHFRLRPE 186

Query: 240 HEQLGPTADALQHAGFEKEKQTIXXXXXXXXXXXXXXXXXXXXXXNIILAKLDAIDXXXX 299
           +  +G   + L+ A   K+K                         N+++AKL+AID    
Sbjct: 187 YRVIGELMNRLKVATELKDK-----FGDNADDEEEQEFDDMKEKDNVLMAKLEAIDRKLE 241

Query: 300 XXXXXXXYTFGKKGKVLEEEIRDLAEERNELTEKKRRPLYRKGFDVKLINVNRTCKVTKG 359
                  YTFG+KGK LEEEI+DLAEERNELTE+KR+PLYRKGFD +LI++NRTCKVTKG
Sbjct: 242 EKLAELEYTFGRKGKALEEEIKDLAEERNELTEQKRKPLYRKGFDTRLIDMNRTCKVTKG 301

Query: 360 GQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERHEEHTIAHAIQ 419
           GQVVKYTAM+ACGNYNGV+GFAKAKGPAVPVALQKAYEKCFQNLH+VERHEEHTIAHA+Q
Sbjct: 302 GQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAVQ 361

Query: 420 TSYKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGSRNPHNTVKAVFKALNA 479
           TSYKKTKVYLWPAPT TGMKAGR V+ ILHLAG KNVKSKV+GSRNPHNTVKAVFKALNA
Sbjct: 362 TSYKKTKVYLWPAPTTTGMKAGRSVEAILHLAGLKNVKSKVIGSRNPHNTVKAVFKALNA 421

Query: 480 IETPRDVQEKFGRTVVEKYLL 500
           IETPRDVQEKFGRTVVEKYLL
Sbjct: 422 IETPRDVQEKFGRTVVEKYLL 442


>Glyma07g31830.1 
          Length = 300

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 78/152 (51%)

Query: 340 RKGFDVKLINVNRTCKVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKC 399
           R GF+ +++ V R  KV KGG+ +++ A++  G+  G VG    K   V  A+QK+    
Sbjct: 141 RDGFEERVVQVRRVTKVVKGGKQLRFRAVVVVGDKKGSVGVGVGKAKEVIAAVQKSAVNA 200

Query: 400 FQNLHFVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSK 459
            +N+  V   +  T  H     Y   KV L PA   TG+ AG  V+ +L +AG +N   K
Sbjct: 201 RRNIIKVPMTKYSTFPHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVENALGK 260

Query: 460 VVGSRNPHNTVKAVFKALNAIETPRDVQEKFG 491
            +GS N  N  +A   A+  ++  R+V E+ G
Sbjct: 261 QLGSNNALNNARATVVAVQKMKQFREVAEERG 292


>Glyma13g24640.1 
          Length = 316

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%)

Query: 340 RKGFDVKLINVNRTCKVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKC 399
           R GF+ +++ V R  KV KGG+ +++ A++  G+  G VG    K   V  A+QK+    
Sbjct: 157 RDGFEERVVQVRRVTKVVKGGKQLRFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNA 216

Query: 400 FQNLHFVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSK 459
            +N+  V   +  T  H     Y   KV L PA   TG+ AG  V+ +L +AG  N   K
Sbjct: 217 RRNIIKVPMTKYSTFPHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVDNALGK 276

Query: 460 VVGSRNPHNTVKAVFKALNAIETPRDVQEKFG 491
            +GS N  N  +A   A+  ++  R+V E+ G
Sbjct: 277 QLGSNNALNNARATVAAVQKMKQFREVAEERG 308