Miyakogusa Predicted Gene

Lj6g3v1915860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1915860.1 tr|B6UIB8|B6UIB8_MAIZE TPD1 OS=Zea mays PE=2
SV=1,42.2,2e-19, ,gene.g66954.t1.1
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15030.1                                                       250   5e-67
Glyma15g20660.1                                                       170   7e-43
Glyma04g37500.2                                                       118   3e-27
Glyma04g37500.1                                                       118   3e-27
Glyma08g01330.1                                                        87   1e-17
Glyma06g17570.1                                                        78   4e-15
Glyma10g13700.1                                                        51   5e-07
Glyma13g26980.1                                                        50   1e-06
Glyma10g12940.1                                                        48   4e-06
Glyma17g33330.1                                                        48   5e-06

>Glyma15g15030.1 
          Length = 168

 Score =  250 bits (639), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 122/169 (72%), Positives = 137/169 (81%), Gaps = 2/169 (1%)

Query: 1   MKMTFTKSCHLF-FLCFIVPLLVFSDVELPQGPKTHILHAFHEGRNGSITVSVKAEEHAH 59
           M MT T SC L  FLCF++PL VF D     GP T  LH+ HE +NGSITVS+K E HAH
Sbjct: 1   MNMTITNSCPLIIFLCFMMPLFVFCDEGTHSGPSTQSLHSSHEDKNGSITVSMKVE-HAH 59

Query: 60  STSSKIWLHGSCTKRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASAR 119
           S S K WLHG+CT +DISISQS+ ST GIPQ+IVQIVN CVSGCAP DIHLHCG FASAR
Sbjct: 60  SASRKFWLHGTCTSKDISISQSQTSTPGIPQFIVQIVNNCVSGCAPSDIHLHCGMFASAR 119

Query: 120 IINPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSAQFC 168
           ++NPR+FKR+SYDDCLVNGGNPL  SQIIRFTYSN+F YPLAFKSA+FC
Sbjct: 120 MVNPRLFKRISYDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 168


>Glyma15g20660.1 
          Length = 99

 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 88/99 (88%)

Query: 70  SCTKRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKRL 129
           +CT +DISISQS+ ST GIPQ+IVQIVN CVSGCAP DIH HCG FASAR++NPR+FKR+
Sbjct: 1   TCTSKDISISQSQTSTPGIPQFIVQIVNNCVSGCAPSDIHFHCGMFASARMVNPRLFKRI 60

Query: 130 SYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSAQFC 168
           S DDCLVNGGNPL  SQIIRFTYSN+F YPLAFKSA+FC
Sbjct: 61  SCDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSAKFC 99


>Glyma04g37500.2 
          Length = 186

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 3/104 (2%)

Query: 63  SKIWLHGSCTKRDISISQSRGST--SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARI 120
           ++IW    C+K D+ I+Q   +   SGIP Y V+I+N CVSGC    IHL CGWF+SAR+
Sbjct: 80  NRIWGE-KCSKSDVVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSARL 138

Query: 121 INPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKS 164
           INP++FKRL Y+DCLVN G PL +   I F Y+N+F+YPL+  S
Sbjct: 139 INPKLFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSS 182


>Glyma04g37500.1 
          Length = 186

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 3/104 (2%)

Query: 63  SKIWLHGSCTKRDISISQSRGST--SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARI 120
           ++IW    C+K D+ I+Q   +   SGIP Y V+I+N CVSGC    IHL CGWF+SAR+
Sbjct: 80  NRIWGE-KCSKSDVVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSARL 138

Query: 121 INPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKS 164
           INP++FKRL Y+DCLVN G PL +   I F Y+N+F+YPL+  S
Sbjct: 139 INPKLFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSS 182


>Glyma08g01330.1 
          Length = 81

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 2/75 (2%)

Query: 67  LHGSCTKRDISISQSRGST--SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPR 124
           +   C+K  I I+QS      SGIP Y V+I NTCVSGC   +IH+ CG F+S+R+INP+
Sbjct: 1   VEEKCSKSVIQINQSPTERLPSGIPTYTVEIANTCVSGCNISEIHVACGMFSSSRLINPK 60

Query: 125 VFKRLSYDDCLVNGG 139
           +FKRL Y+DCLVN G
Sbjct: 61  IFKRLLYNDCLVNDG 75


>Glyma06g17570.1 
          Length = 59

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 110 LHCGWFASARIINPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSA 165
           + CGWF+SAR+INP++FKRL Y+DCLVN G PL +   I F Y+N+F+YPL+  S 
Sbjct: 1   MGCGWFSSARLINPKLFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSV 56


>Glyma10g13700.1 
          Length = 124

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 71  CTKRDISISQSRG--STSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKR 128
           C+  +I+I  SR      G P++ V ++N C   C    I L C  F SA  ++P +   
Sbjct: 25  CSLNNINIGTSRTGREIQGQPEWNVTVINNC--NCEQSQIKLSCKGFQSAESVDPSILS- 81

Query: 129 LSYDDCLVNGGNPLESSQIIRFTYS 153
           +  D CL+  GNP++ S  + F+Y+
Sbjct: 82  MEGDSCLLINGNPMKGSDTVNFSYA 106


>Glyma13g26980.1 
          Length = 122

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 71  CTKRDISISQSRG--STSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKR 128
           CT R +S+SQS       G P++ V I NTC   CA   ++L+C  F ++  I P V   
Sbjct: 21  CTLRSLSVSQSMTGVKVQGKPEWSVSITNTC--PCAQRMVYLNCTDFQTSEPITPSVLTV 78

Query: 129 LSYDDCLVNGGNPLESSQIIRFTYS 153
                C++N G P+  +   RF Y+
Sbjct: 79  SPNGICILNSGQPIVYNSPFRFKYA 103


>Glyma10g12940.1 
          Length = 121

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 71  CTKRDISISQSRGS--TSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKR 128
           C+  +I+I  +R      G P++ V ++N C   C    I L C  F ++  ++P +   
Sbjct: 24  CSINNINIGTTRSGRVIQGQPEWNVVVINNCT--CTQSQIRLSCKGFKTSESVSPSILS- 80

Query: 129 LSYDDCLVNGGNPLESSQIIRFTYS 153
           +  D CL+  GNPL S   +RF+Y+
Sbjct: 81  IEGDSCLLINGNPLNSFATVRFSYA 105


>Glyma17g33330.1 
          Length = 122

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 68  HGSCTKRDISISQSRGST--SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRV 125
           +  C   D+S+SQ +      G P++ V I N C   C   ++ L C  F S   I+P +
Sbjct: 22  YSQCFLSDLSVSQIQTGVKMQGKPEWNVTITNNC--SCVQKNVILSCNGFQSVEQIDPSL 79

Query: 126 FKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPL 160
            K +S + CLVN G P+ +   I+F Y  +  +PL
Sbjct: 80  LK-ISPNGCLVNDGQPIYTDA-IKFKYVWNQSFPL 112