Miyakogusa Predicted Gene

Lj6g3v1901370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1901370.1 tr|Q3LUS2|Q3LUS2_9ROSI S-adenosylmethionine
decarboxylase 3 (Fragment) OS=Populus maximowiczii x
Pop,66.2,3e-19,SAM_decarbox,S-adenosylmethionine decarboxylase;
S-adenosylmethionine decarboxylase,S-adenosylmethio,CUFF.60127.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g10780.1                                                       146   6e-36
Glyma17g02340.1                                                       143   4e-35
Glyma07g38420.1                                                       142   9e-35
Glyma13g28280.1                                                       139   7e-34
Glyma17g07830.1                                                        89   2e-18
Glyma18g51380.1                                                        85   2e-17
Glyma02g14180.2                                                        84   3e-17
Glyma02g14180.1                                                        84   3e-17
Glyma01g10080.1                                                        84   4e-17
Glyma08g28430.1                                                        83   8e-17

>Glyma15g10780.1 
          Length = 343

 Score =  146 bits (368), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 64/89 (71%), Positives = 70/89 (78%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           MEICMTDLDP LARKFF+RP            MTEL+GI EIN +AL+CDFAFDPCGYSM
Sbjct: 177 MEICMTDLDPVLARKFFRRPGDGKTGDSAGKEMTELTGIGEINSHALVCDFAFDPCGYSM 236

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFECAAA 89
           N MD +WYSTIHVTPEDGYSYASFEC  +
Sbjct: 237 NGMDGEWYSTIHVTPEDGYSYASFECVGS 265


>Glyma17g02340.1 
          Length = 353

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 66/91 (72%), Positives = 72/91 (79%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           MEICMT+LDP LARKFF+RP            MTEL+GINEIN +ALICDFAFDPCGYSM
Sbjct: 187 MEICMTELDPILARKFFRRPDDEKSGDSAGKEMTELTGINEINPDALICDFAFDPCGYSM 246

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFECAAARD 91
           N MD DWYSTIHVTPEDG+SYASFEC  + D
Sbjct: 247 NGMDGDWYSTIHVTPEDGFSYASFECVGSVD 277


>Glyma07g38420.1 
          Length = 346

 Score =  142 bits (358), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 65/89 (73%), Positives = 70/89 (78%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           MEICMT+LDP LARKFF+RP            MTEL+GINEIN  ALICDFAFDPCGYSM
Sbjct: 182 MEICMTELDPILARKFFRRPEDEKTGDSAGKEMTELTGINEINPEALICDFAFDPCGYSM 241

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFECAAA 89
           N MD DWYSTIHVTPEDG+SYASFEC  +
Sbjct: 242 NGMDGDWYSTIHVTPEDGFSYASFECVGS 270


>Glyma13g28280.1 
          Length = 350

 Score =  139 bits (350), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/99 (64%), Positives = 73/99 (73%), Gaps = 6/99 (6%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           MEICMTDLDP LARKFF+R             MTE++G++EIN  AL+CDFAFDPCGYSM
Sbjct: 185 MEICMTDLDPVLARKFFRRAGDGKTGDSAGKEMTEITGVDEINPQALVCDFAFDPCGYSM 244

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFECAAARDYVGVHNDN 99
           N +D +WYSTIHVTPEDGYSYASFEC      VG  ND+
Sbjct: 245 NGIDGEWYSTIHVTPEDGYSYASFEC------VGSVNDD 277


>Glyma17g07830.1 
          Length = 358

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 8/85 (9%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           +EICMT LD   AR F +              MTE+SGI+EI ++ +ICDF F+PCGYSM
Sbjct: 175 VEICMTGLDRDKARVFHKE--------WGGGKMTEMSGISEIVQSHVICDFEFEPCGYSM 226

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFE 85
           N ++   +ST+HVTPE+G+SY S+E
Sbjct: 227 NGIEGAAFSTVHVTPENGFSYGSYE 251


>Glyma18g51380.1 
          Length = 359

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/85 (51%), Positives = 52/85 (61%), Gaps = 6/85 (7%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           +E+CMT LD   A  FF+              MTE SGI +I   + I DF FDPCGYSM
Sbjct: 180 LEMCMTGLDKESASVFFKE------NTSSAASMTENSGIRKILPQSDISDFEFDPCGYSM 233

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFE 85
           N ++    STIHVTPEDG+SYASFE
Sbjct: 234 NGIEGSAISTIHVTPEDGFSYASFE 258


>Glyma02g14180.2 
          Length = 353

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 6/85 (7%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           +E+CMT LD   A+ F++              MT  SGI +I  ++ ICDF F+PCGYSM
Sbjct: 180 LEMCMTGLDREKAQVFYKE------QSASAAMMTVNSGIRKILPDSEICDFDFEPCGYSM 233

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFE 85
           NS++    STIHVTPEDG+SYASFE
Sbjct: 234 NSVEGAAVSTIHVTPEDGFSYASFE 258


>Glyma02g14180.1 
          Length = 355

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 6/85 (7%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           +E+CMT LD   A+ F++              MT  SGI +I  ++ ICDF F+PCGYSM
Sbjct: 182 LEMCMTGLDREKAQVFYKE------QSASAAMMTVNSGIRKILPDSEICDFDFEPCGYSM 235

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFE 85
           NS++    STIHVTPEDG+SYASFE
Sbjct: 236 NSVEGAAVSTIHVTPEDGFSYASFE 260


>Glyma01g10080.1 
          Length = 353

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 6/85 (7%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           +E+CMT LD   A+ F++              MT  SGI +I  ++ ICDF F+PCGYSM
Sbjct: 180 LEMCMTGLDREKAQVFYKE------QSASAAIMTVNSGIRKILPDSEICDFDFEPCGYSM 233

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFE 85
           NS++    STIHVTPEDG+SYASFE
Sbjct: 234 NSVEGAAVSTIHVTPEDGFSYASFE 258


>Glyma08g28430.1 
          Length = 359

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 6/85 (7%)

Query: 1   MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
           +E+CMT L+   A  FF+              MTE SGI +I   + I DF FDPCGYSM
Sbjct: 180 LEMCMTGLEKESASVFFKE------NTSSAALMTENSGIRKILPQSDISDFEFDPCGYSM 233

Query: 61  NSMDEDWYSTIHVTPEDGYSYASFE 85
           N ++    STIHVTPEDG+SYASFE
Sbjct: 234 NGIEGGAISTIHVTPEDGFSYASFE 258