Miyakogusa Predicted Gene

Lj6g3v1898080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1898080.1 Non Chatacterized Hit- tr|I1GZ12|I1GZ12_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.8,6e-18,coiled-coil,NULL,gene.g66888.t1.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08930.1                                                       219   1e-57
Glyma05g07440.1                                                       214   6e-56
Glyma05g21640.1                                                       110   6e-25

>Glyma17g08930.1 
          Length = 327

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 114/178 (64%), Positives = 137/178 (76%), Gaps = 20/178 (11%)

Query: 1   MSSVNEKLDELKHQAAQKDSLLKSTQQQLFDVKLLNGVESVSWKNARYRFPQMMLADNQA 60
           M+  N KLDELKHQA++K+SLLK TQQQL D K+                    LAD QA
Sbjct: 166 MNVFNAKLDELKHQASEKESLLKYTQQQLSDAKI-------------------KLADKQA 206

Query: 61  ALEKIQWESMISNKKAEKLQEEIGSMQGDLSSFTLLLEGLTITDNAEYIDDYDIKPYVHS 120
           ALEKIQWE+M SNKK +KLQ+E+GSMQ D++SFTLLLEGL+ TD A+Y DDYD+KPY  S
Sbjct: 207 ALEKIQWEAMTSNKKVDKLQDELGSMQADITSFTLLLEGLSKTDTAKYTDDYDVKPYDFS 266

Query: 121 NHLPSIDDLDEMEMHKIEEARKAYNVAVAYAKEKQDQESIAAAANARLHLQSILFKPK 178
            HLPSIDDLDEME+ K+EEARK+Y  AV+ +KEK+D+ESIAAAANARLHLQS++FK K
Sbjct: 267 -HLPSIDDLDEMELQKMEEARKSYMAAVSVSKEKRDEESIAAAANARLHLQSLVFKSK 323


>Glyma05g07440.1 
          Length = 327

 Score =  214 bits (544), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 111/178 (62%), Positives = 137/178 (76%), Gaps = 20/178 (11%)

Query: 1   MSSVNEKLDELKHQAAQKDSLLKSTQQQLFDVKLLNGVESVSWKNARYRFPQMMLADNQA 60
           M++ N KLDELKHQA++K+SLLK TQQQL D K+                    LAD QA
Sbjct: 166 MNAFNAKLDELKHQASEKESLLKYTQQQLSDAKI-------------------KLADKQA 206

Query: 61  ALEKIQWESMISNKKAEKLQEEIGSMQGDLSSFTLLLEGLTITDNAEYIDDYDIKPYVHS 120
           ALEKIQWE+M SNKK +KL +E+GSMQ D++SFTLLLEGL+ TD A+Y +DYD+KPY  S
Sbjct: 207 ALEKIQWEAMTSNKKVDKLLDELGSMQADITSFTLLLEGLSKTDTAKYTNDYDVKPYDFS 266

Query: 121 NHLPSIDDLDEMEMHKIEEARKAYNVAVAYAKEKQDQESIAAAANARLHLQSILFKPK 178
            HLPSIDDLDE+E+ K++EARKAY  AV+ +KEK+D+ESIAAAANARLHLQS++FK K
Sbjct: 267 -HLPSIDDLDEVELQKMDEARKAYMAAVSISKEKRDEESIAAAANARLHLQSLVFKSK 323


>Glyma05g21640.1 
          Length = 491

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 55  LADNQAALEKIQWESMISNKKAEKLQEEIGSMQGDLSSFTLLLEGLTITDNAEYIDDYDI 114
           LAD QAALEKIQWE+M SNKK +KLQ+E+GSMQ D++SFTLLLEGL+ TD A+Y DDYD+
Sbjct: 13  LADKQAALEKIQWEAMTSNKKVDKLQDEVGSMQVDITSFTLLLEGLSKTDTAKYTDDYDV 72

Query: 115 KPYVHSNHLPSI 126
           KPY  S HLPSI
Sbjct: 73  KPYDFS-HLPSI 83