Miyakogusa Predicted Gene

Lj6g3v1879930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1879930.1 Non Chatacterized Hit- tr|E1Z2G6|E1Z2G6_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,37.5,0.0000000002,SUBFAMILY NOT NAMED,NULL; RNA
PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN,NULL; Pseudouridine
synthase,P,NODE_71804_length_1314_cov_9.027397.path2.1
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27660.1                                                       311   1e-85
Glyma15g11300.1                                                       308   1e-84

>Glyma13g27660.1 
          Length = 473

 Score =  311 bits (798), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 140/161 (86%), Positives = 151/161 (93%)

Query: 1   MRPVNTAPRLISEDFIKGWHRCQLEVLECRKVPWPTTVIQDKYCVEDCGWPSQDHAYECI 60
           MRP+N APRLISEDFIKGWH CQLEVLECRK+PWPTT IQDKYCVEDCGWPSQD+AYEC 
Sbjct: 313 MRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECK 372

Query: 61  INLLTGKTHQIRAQFSACKAPLIGDSMYMPAAMAEISNPGLNPFGKYKKDFSIESEEEIA 120
           INLLTGKTHQIRAQF+A KAPLIGDSMYMPAA+A++SNPGLNPFGKYKKDFS ESE+E A
Sbjct: 373 INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETA 432

Query: 121 VINWIAQHGKEPSVVIGLQACQISWDDKEHFYQAGSPWWRC 161
           V+NW+AQHGKEPSV IGLQACQISWDD EHFY+AG PWWRC
Sbjct: 433 VVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWRC 473


>Glyma15g11300.1 
          Length = 451

 Score =  308 bits (789), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 139/161 (86%), Positives = 149/161 (92%)

Query: 1   MRPVNTAPRLISEDFIKGWHRCQLEVLECRKVPWPTTVIQDKYCVEDCGWPSQDHAYECI 60
           MRP++ APRLISEDFIKGWH CQLEVLECRKVPWP T IQDKYC+EDCGWPSQD+AYEC 
Sbjct: 291 MRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYECK 350

Query: 61  INLLTGKTHQIRAQFSACKAPLIGDSMYMPAAMAEISNPGLNPFGKYKKDFSIESEEEIA 120
           INLLTGKTHQIRAQF+A KAPLIGDSMYMPAA+A +SNPGLNPFGKYKKDFS ESE+E A
Sbjct: 351 INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKETA 410

Query: 121 VINWIAQHGKEPSVVIGLQACQISWDDKEHFYQAGSPWWRC 161
           V+NWIAQHGKEPSV IGLQACQISWDD EHFY+A SPWWRC
Sbjct: 411 VVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWRC 451