Miyakogusa Predicted Gene

Lj6g3v1879920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1879920.1 Non Chatacterized Hit- tr|E1Z2G6|E1Z2G6_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,33.5,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; RNA
PSEUDOURIDYLATE SYNTHASE FAMILY
PROTEIN,NULL,NODE_71802_length_816_cov_7.406863.path1.1
         (268 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27660.1                                                       395   e-110
Glyma15g11300.1                                                       335   3e-92

>Glyma13g27660.1 
          Length = 473

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/271 (73%), Positives = 220/271 (81%), Gaps = 9/271 (3%)

Query: 4   VAVASMFFAGDCRSFAVPPVSRALR-------NSLNKHAFSWRCRSSHGSNPAITGESVT 56
           + VASM FAG CR  AVP  +RA+R       +  NKHA SW CRSSH SN A+ GE+  
Sbjct: 1   MTVASMLFAGGCRILAVPAAARAIRIPRAALSSHHNKHAPSWGCRSSHNSNTALAGEAEF 60

Query: 57  STIDDAGNLPXXXXXXXXYPKYDRLLPCPLHKSPPRIEHLVVSEGGPVLEYICKSLDLPP 116
           ST D AGNL         +PKYDRLLPCP HK+PPRIEHLV+SEGGPVLE ICK+LDLPP
Sbjct: 61  STTD-AGNL-TATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPP 118

Query: 117 LFVADLIQFGAVYYALVXXXXXXSATPEQMRIFKQVTEPSVLQKRTSIKGKTVQAAQKTF 176
           L+V+DLIQFGAVYYALV      +AT EQ+R+FK+VTEPSVL+KR SIKGKTV+ AQKTF
Sbjct: 119 LYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTF 178

Query: 177 RITHGDQFVEPGTYLRVHVHPKRFPRCYEIDWRSRVIAVAESYVVLDKPAGTSVGETRGN 236
           R+TH DQFVEPGTYLRVHVHPKRFPR YEIDWRSR+IAVAESYVVLDKPAGTSVG T  N
Sbjct: 179 RVTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDN 238

Query: 237 IEESCVTFATRALGLTTPLLTTHQIDNCTEG 267
           IEESC TFATRALG+TTPL+TTHQIDNCTEG
Sbjct: 239 IEESCATFATRALGMTTPLMTTHQIDNCTEG 269


>Glyma15g11300.1 
          Length = 451

 Score =  335 bits (860), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 163/207 (78%), Positives = 179/207 (86%), Gaps = 1/207 (0%)

Query: 61  DAGNLPXXXXXXXXYPKYDRLLPCPLHKSPPRIEHLVVSEGGPVLEYICKSLDLPPLFVA 120
           DAG L         + KYDRLLPCP HK+PPRIEHLVVSEGGPVLE+ICK+LDLPPL+V+
Sbjct: 42  DAGIL-NATSSSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVS 100

Query: 121 DLIQFGAVYYALVXXXXXXSATPEQMRIFKQVTEPSVLQKRTSIKGKTVQAAQKTFRITH 180
           DLIQFGAVYYALV      +AT EQ+R+FK+VTEPSVL+KR SIKGKTV+ AQKTFR+TH
Sbjct: 101 DLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTH 160

Query: 181 GDQFVEPGTYLRVHVHPKRFPRCYEIDWRSRVIAVAESYVVLDKPAGTSVGETRGNIEES 240
            DQFVEPGTYLRVHVHPKR PRCYEIDWRSR+I VAESYVVLDKPAGTSVG T  NIEES
Sbjct: 161 VDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEES 220

Query: 241 CVTFATRALGLTTPLLTTHQIDNCTEG 267
           C TFATRALG+TTPL+TTHQIDNCTEG
Sbjct: 221 CATFATRALGMTTPLMTTHQIDNCTEG 247