Miyakogusa Predicted Gene

Lj6g3v1812090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1812090.1 Non Chatacterized Hit- tr|I1QIS5|I1QIS5_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,61.97,1e-18,RcbX,Chaperonin-like RbcX,CUFF.60078.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g11800.1                                                       187   3e-48
Glyma09g00950.1                                                       182   8e-47

>Glyma15g11800.1 
          Length = 172

 Score =  187 bits (475), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 100/123 (81%), Gaps = 1/123 (0%)

Query: 1   MESSPNLALSQLPSVYSAIPSSKYRNYPFWPGNKRRSSPSTRIQCNKMFVPGFGEASPEA 60
           MES   L LSQLP VY +  SS  + YPFWP  +R SS  TR+ C+KMFVPGFGEASPEA
Sbjct: 1   MESCATLPLSQLPYVYPSTLSSN-KAYPFWPCKRRSSSQPTRLHCSKMFVPGFGEASPEA 59

Query: 61  KAANNLHNFFTYTAVKIVAAQLESYNPEAYEELMDFVGRHPLDDGDKFCATMFRESSRHK 120
           KAA NLHNFFT+ AVKIVAAQLESYN EAYEELM+F+ RH L+DGDKFCA+MFRESSRHK
Sbjct: 60  KAAQNLHNFFTFVAVKIVAAQLESYNHEAYEELMEFLSRHSLNDGDKFCASMFRESSRHK 119

Query: 121 NLG 123
           NL 
Sbjct: 120 NLA 122


>Glyma09g00950.1 
          Length = 172

 Score =  182 bits (462), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 98/123 (79%), Gaps = 1/123 (0%)

Query: 1   MESSPNLALSQLPSVYSAIPSSKYRNYPFWPGNKRRSSPSTRIQCNKMFVPGFGEASPEA 60
           ME    L LSQLP VY +  SS  + YPFW   +R SS  TR+ C+KMFVPGFGEASPEA
Sbjct: 1   MEFCATLPLSQLPYVYPSTLSSN-KAYPFWSCKRRISSRPTRLHCSKMFVPGFGEASPEA 59

Query: 61  KAANNLHNFFTYTAVKIVAAQLESYNPEAYEELMDFVGRHPLDDGDKFCATMFRESSRHK 120
           KAA NLHNFFT+ AVKIVAAQLESYN EAYEELM+F+ RH L+DGDKFCATMFRESSRHK
Sbjct: 60  KAAENLHNFFTFVAVKIVAAQLESYNHEAYEELMEFLSRHSLNDGDKFCATMFRESSRHK 119

Query: 121 NLG 123
           NL 
Sbjct: 120 NLA 122