Miyakogusa Predicted Gene
- Lj6g3v1786750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1786750.1 tr|B9N8I4|B9N8I4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584752 PE=4
SV=1,46.39,8e-19,DUF506,Protein of unknown function DUF506,
plant,CUFF.59926.1
(100 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g12060.1 155 1e-38
Glyma09g01240.1 152 6e-38
Glyma09g12130.1 134 2e-32
Glyma07g39490.1 129 5e-31
Glyma16g10000.1 56 1e-08
Glyma02g16140.1 51 3e-07
Glyma12g12870.2 49 1e-06
Glyma12g12870.1 49 1e-06
Glyma10g03650.1 49 2e-06
Glyma05g32360.2 47 6e-06
Glyma05g32360.1 47 6e-06
Glyma08g15630.1 47 6e-06
Glyma13g24760.1 47 6e-06
Glyma05g32360.3 47 7e-06
>Glyma15g12060.1
Length = 312
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPD-SLFPKRS 59
MC+A+KGSMK+ +LH+PPWRRN YMQAKWFS+YKRT+NAVA+++A+ +S D SLFPKRS
Sbjct: 214 MCTALKGSMKRMNLHIPPWRRNMYMQAKWFSAYKRTTNAVATKRASLPLSSDESLFPKRS 273
Query: 60 IGFEARPVKAYNCREHYVSKTGFRIGHLTAAFNSDSFG 97
+GFE RPVKA+NCR+ Y + TGFRIGHLTA NSD+ G
Sbjct: 274 MGFEVRPVKAHNCRDVYATITGFRIGHLTAVLNSDNLG 311
>Glyma09g01240.1
Length = 282
Score = 152 bits (385), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPD-SLFPKRS 59
MC+AIKGSMK+ LH+PPWRRN YMQAKWF +YKRT+NAVA+++ + +S D SLFPKRS
Sbjct: 184 MCTAIKGSMKRMKLHIPPWRRNVYMQAKWFGAYKRTTNAVATKRVSLPLSSDESLFPKRS 243
Query: 60 IGFEARPVKAYNCREHYVSKTGFRIGHLTAAFNSDSFG 97
IGFE RPVKA+ CR+ Y + TGFR GHLTA FNSDS G
Sbjct: 244 IGFEVRPVKAHKCRDVYATNTGFRTGHLTAVFNSDSLG 281
>Glyma09g12130.1
Length = 169
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKA-TSTVSPDSLFPKRS 59
MC+A+KGSMK+ +LH+PPWRRN YMQAKW S+YK T+NAVA+++A S S +SLFPKRS
Sbjct: 71 MCTALKGSMKRMNLHIPPWRRNMYMQAKWLSAYKHTTNAVATKRASLSLSSNESLFPKRS 130
Query: 60 IGFEARPVKAYNCREHYVSKTGFRIGHLTAAFNSDSFG 97
+GFE RPVKA+NC++ Y TGFRIGH T NSD+ G
Sbjct: 131 MGFEVRPVKAHNCKDVYAINTGFRIGHWTVVLNSDNLG 168
>Glyma07g39490.1
Length = 297
Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 76/100 (76%), Gaps = 5/100 (5%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MC+AIKGSMK ++++PPWRR YMQAKWFSSYKR ++ VA+ +A+S + F RSI
Sbjct: 203 MCTAIKGSMKSMNMYIPPWRRIGYMQAKWFSSYKRITDEVATNRASS-----AFFTTRSI 257
Query: 61 GFEARPVKAYNCREHYVSKTGFRIGHLTAAFNSDSFGMQL 100
GF+ARPVK+YNCR+ Y +K FR+ HLT AF DS GMQL
Sbjct: 258 GFDARPVKSYNCRDDYGTKPAFRVCHLTTAFYVDSPGMQL 297
>Glyma16g10000.1
Length = 299
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
+C + K L LPPWR+N YMQ KWF Y+RT+N V + VS S R +
Sbjct: 225 LCGVARRCFGKRGLSLPPWRKNRYMQNKWFGPYRRTANPVHGNPVPTVVSALSGAKCRFV 284
Query: 61 GFE 63
GF+
Sbjct: 285 GFD 287
>Glyma02g16140.1
Length = 359
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 3 SAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNA 39
A K S+KK +H+PPWRR Y++AKW S Y RT+N+
Sbjct: 253 EAAKQSLKKKGMHVPPWRRAEYVKAKWLSPYTRTTNS 289
>Glyma12g12870.2
Length = 287
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSS 32
MCSA K MK+ +H+ PWR++ YMQAKWFS+
Sbjct: 210 MCSASKKCMKEKKMHIGPWRKHKYMQAKWFST 241
>Glyma12g12870.1
Length = 287
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSS 32
MCSA K MK+ +H+ PWR++ YMQAKWFS+
Sbjct: 210 MCSASKKCMKEKKMHIGPWRKHKYMQAKWFST 241
>Glyma10g03650.1
Length = 365
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 3 SAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSN 38
A K S+KK +H+PPWRR Y++AKW S Y RT +
Sbjct: 263 EAAKQSLKKKGMHVPPWRRTEYVKAKWLSPYTRTHD 298
>Glyma05g32360.2
Length = 271
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFS-SYKRTSNA 39
+CSA K +++ LH+PPWR +YMQAKW S S K S+A
Sbjct: 176 LCSAAKQCLREKGLHVPPWRTTSYMQAKWLSVSPKEPSHA 215
>Glyma05g32360.1
Length = 272
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFS-SYKRTSNA 39
+CSA K +++ LH+PPWR +YMQAKW S S K S+A
Sbjct: 177 LCSAAKQCLREKGLHVPPWRTTSYMQAKWLSVSPKEPSHA 216
>Glyma08g15630.1
Length = 265
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFS-SYKRTSNAV--------ASRKATSTVSP 51
+CSA K +++ LH+PPWR +YMQAKW S S K S+ V A P
Sbjct: 177 LCSAAKQCLREKGLHVPPWRTASYMQAKWLSVSRKEPSHDVIGYDDHEHADADIIGNWVP 236
Query: 52 DSLFPKR 58
SL PK+
Sbjct: 237 PSLKPKK 243
>Glyma13g24760.1
Length = 329
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKR 35
+C K MK++ +H+ PWR++ YMQAKW S KR
Sbjct: 236 LCMGAKKCMKENKMHMGPWRKHKYMQAKWLGSCKR 270
>Glyma05g32360.3
Length = 248
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFS-SYKRTSNA 39
+CSA K +++ LH+PPWR +YMQAKW S S K S+A
Sbjct: 153 LCSAAKQCLREKGLHVPPWRTTSYMQAKWLSVSPKEPSHA 192