Miyakogusa Predicted Gene

Lj6g3v1766610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1766610.1 Non Chatacterized Hit- tr|C6JRY0|C6JRY0_SORBI
Putative uncharacterized protein Sb0013s009080
OS=Sorg,56.69,1e-18,seg,NULL; TFIIF_alpha,Transcription initiation
factor IIF, alpha subunit; TFIIF-ALPHA,NULL,CUFF.59956.1
         (301 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g12090.1                                                       458   e-129
Glyma09g01260.1                                                       458   e-129

>Glyma15g12090.1 
          Length = 539

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/300 (76%), Positives = 241/300 (80%), Gaps = 5/300 (1%)

Query: 2   DLQLKSSCSGCGSTADLYGSNCKHMTLCLTCGKTMAENRAKCRDCGATLNRLIREYSVRA 61
           DLQLKSSCSGCGST DLYGSNCKHMTLCL+CGKTMAE RAKC DCGATL RLIREY+VRA
Sbjct: 4   DLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAEKRAKCFDCGATLTRLIREYNVRA 63

Query: 62  SSPSDKHYCIGRFMTGLPDFSRKKSAENKWSLQKDGLQGRQITDTLREKYKNKPWVLEDE 121
           SS +DK+Y IGRF+ GLPDFS+KKSAENKWSLQKDGL GRQITDTLREKYKNKPW+LEDE
Sbjct: 64  SSTNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLLEDE 123

Query: 122 TGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 181
           TGQSQFQGHLEGSQSATYYLLMKE+KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR
Sbjct: 124 TGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 183

Query: 182 KKTADGYERWMMKVANNGPAAFGEHGRFDDKESITGGGRSRKKTGEDDEGNVSXXXXXXX 241
           KKTADGY+RWMMK ANNGPAAFGEHG+FDDKES TGG R RKKTGEDDEG+VS       
Sbjct: 184 KKTADGYQRWMMKAANNGPAAFGEHGKFDDKESNTGGVRIRKKTGEDDEGHVS---DKGE 240

Query: 242 XXXXXXXXXXNRFGQNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAV 301
                     +R G NK+                            WEHEEIFTDDDEAV
Sbjct: 241 EDEEEESERKSRLGLNKR--AGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAV 298


>Glyma09g01260.1 
          Length = 536

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/300 (75%), Positives = 239/300 (79%), Gaps = 5/300 (1%)

Query: 2   DLQLKSSCSGCGSTADLYGSNCKHMTLCLTCGKTMAENRAKCRDCGATLNRLIREYSVRA 61
           DLQLKSSCSGCGST DLYGSNCKHMTLCL CGKTMA  RAKC DCGATL RLIREY+VRA
Sbjct: 4   DLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYNVRA 63

Query: 62  SSPSDKHYCIGRFMTGLPDFSRKKSAENKWSLQKDGLQGRQITDTLREKYKNKPWVLEDE 121
           SSP+DK+Y IGRF+ GLPDFS+KKSAENKWSLQKDGL GRQITDTLREKYKNKPW+LEDE
Sbjct: 64  SSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLLEDE 123

Query: 122 TGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 181
           TGQSQFQGHLEGSQSATYYLLMKE+KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR
Sbjct: 124 TGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 183

Query: 182 KKTADGYERWMMKVANNGPAAFGEHGRFDDKESITGGGRSRKKTGEDDEGNVSXXXXXXX 241
           KKTADGY+RWMMK ANNGPAAFGEHG+FDD ES TGGGRS KKT EDDEG+VS       
Sbjct: 184 KKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDEGHVS---DKGE 240

Query: 242 XXXXXXXXXXNRFGQNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAV 301
                     +R G NK+                            WEHEEIFTDDDEAV
Sbjct: 241 EDEEEESERKSRLGLNKR--AGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAV 298