Miyakogusa Predicted Gene
- Lj6g3v1753380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1753380.1 Non Chatacterized Hit- tr|I3T7V1|I3T7V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,46,2e-16,RVT_3,NULL; Ribonuclease H-like,Ribonuclease H-like
domain; RNASE_H,Ribonuclease H domain; no descri,CUFF.59904.1
(124 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g34840.1 65 2e-11
Glyma17g33380.1 55 1e-08
Glyma15g31760.1 55 2e-08
Glyma13g29590.1 54 3e-08
Glyma03g02020.2 51 2e-07
Glyma03g02010.1 51 3e-07
Glyma03g02000.1 51 3e-07
Glyma03g02020.1 51 3e-07
Glyma03g02020.3 51 3e-07
Glyma15g09420.1 50 6e-07
Glyma11g31290.1 50 7e-07
Glyma18g49270.1 48 3e-06
>Glyma07g34840.1
Length = 1562
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 5 WPAPSLNQVALNVDGSSYGNPGRAGFGGLMRDHDGKWLIGFSGHVDFADSLEVELLAILH 64
W +P + LNVDGS G GG++ DH W++G DS + E++A+ H
Sbjct: 1454 WQSPPSGSLKLNVDGSCLLESSSIGAGGVICDHTYNWIVGVYSFDGLGDSAKAEIMALRH 1513
Query: 65 GLRIAWDIGATDVSCRSDCTKALSLIQN---PISHTH 98
GL +AWD G ++ C D + + N P H H
Sbjct: 1514 GLILAWDKGFRNILCEMDNKNMVDIFNNNCCPDFHPH 1550
>Glyma17g33380.1
Length = 213
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 2 LVSWPAPSLNQVALNVDGSSYGNPGRAGFGGLMRDHDGKWLIGFSGHVDFADSLEVELLA 61
L S+ L + LN D SS GN G +GF G+ RD G W F GH ++ VELLA
Sbjct: 73 LDSFQGIFLRKRPLNTDESSLGNIGSSGFKGIGRDSQGLWFFEFYGHYGHTTNMHVELLA 132
Query: 62 ILHGLRIAWDIGATDV 77
I++ + AW+ G +
Sbjct: 133 IINRMCHAWNNGFRHI 148
>Glyma15g31760.1
Length = 228
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 1 MLVSWPAP-SLNQVA-LNVDGSSYGNPGRAGFGGLMRDHDGKWLIGFSGHVDFADSLEVE 58
+++++PAP + V +N+DG+ GNPG GF G++ + WL F F SL+VE
Sbjct: 160 IIMAFPAPLQMKPVCHVNMDGNFKGNPGNPGFSGILTEEFDNWLASFLECCGFTISLQVE 219
Query: 59 LLAILHGL 66
L+AI HGL
Sbjct: 220 LIAIFHGL 227
>Glyma13g29590.1
Length = 547
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 31 GGLMRDHDGKWLIGFSGHVDFADSLEVELLAILHGLRIAWDIGATDVSCRSDCTKALSLI 90
GGL+RD G +L GF+ ++ EL ++HGL++AWD+G V D AL L+
Sbjct: 404 GGLVRDSSGCYLGGFTVNLGNTSVTLAELWGVVHGLKLAWDLGCKKVKVDIDSGNALGLV 463
Query: 91 QN-PISHTHRYAXYGILPHLQRKQPMCRF 118
++ P+++ +A + L RK+ + F
Sbjct: 464 RHGPVANDPAFALVSEINELVRKEWLVEF 492
>Glyma03g02020.2
Length = 242
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 2 LVSWPAPSLNQVALNVDG--SSYGNPGRAGFGGLMRDHDGKWLIGFS-GHVDFADSLEVE 58
LV W P LN DG + YGN G AG G++RD G++++GFS ++ + +LE E
Sbjct: 77 LVWWTPPPRGFFKLNCDGAFTVYGNKGAAG--GVLRDWKGEFILGFSDALIECSSALEAE 134
Query: 59 LLAILHGLRIAWDIGATDVSCRSDCTKALSLIQ 91
L AI G++ G ++ SD KA+ +I
Sbjct: 135 LWAIKIGMQTVVARGYRNLIVESDSLKAIQIIN 167
>Glyma03g02010.1
Length = 281
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 2 LVSWPAPSLNQVALNVDG--SSYGNPGRAGFGGLMRDHDGKWLIGFS-GHVDFADSLEVE 58
LV W P LN DG + YGN G AG G++RD G++++GFS ++ + +LE E
Sbjct: 116 LVWWTPPPRGFFKLNCDGAFTVYGNKGAAG--GVLRDWKGEFILGFSDALIECSSALEAE 173
Query: 59 LLAILHGLRIAWDIGATDVSCRSDCTKALSLIQ 91
L AI G++ G ++ SD KA+ +I
Sbjct: 174 LWAIKIGMQTVVARGYRNLIVESDSLKAIQIIN 206
>Glyma03g02000.1
Length = 281
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 2 LVSWPAPSLNQVALNVDG--SSYGNPGRAGFGGLMRDHDGKWLIGFS-GHVDFADSLEVE 58
LV W P LN DG + YGN G AG G++RD G++++GFS ++ + +LE E
Sbjct: 116 LVWWTPPPRGFFKLNCDGAFTVYGNKGAAG--GVLRDWKGEFILGFSDALIECSSALEAE 173
Query: 59 LLAILHGLRIAWDIGATDVSCRSDCTKALSLIQ 91
L AI G++ G ++ SD KA+ +I
Sbjct: 174 LWAIKIGMQTVVARGYRNLIVESDSLKAIQIIN 206
>Glyma03g02020.1
Length = 254
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 2 LVSWPAPSLNQVALNVDG--SSYGNPGRAGFGGLMRDHDGKWLIGFS-GHVDFADSLEVE 58
LV W P LN DG + YGN G AG G++RD G++++GFS ++ + +LE E
Sbjct: 89 LVWWTPPPRGFFKLNCDGAFTVYGNKGAAG--GVLRDWKGEFILGFSDALIECSSALEAE 146
Query: 59 LLAILHGLRIAWDIGATDVSCRSDCTKALSLIQ 91
L AI G++ G ++ SD KA+ +I
Sbjct: 147 LWAIKIGMQTVVARGYRNLIVESDSLKAIQIIN 179
>Glyma03g02020.3
Length = 250
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 2 LVSWPAPSLNQVALNVDG--SSYGNPGRAGFGGLMRDHDGKWLIGFS-GHVDFADSLEVE 58
LV W P LN DG + YGN G AG G++RD G++++GFS ++ + +LE E
Sbjct: 85 LVWWTPPPRGFFKLNCDGAFTVYGNKGAAG--GVLRDWKGEFILGFSDALIECSSALEAE 142
Query: 59 LLAILHGLRIAWDIGATDVSCRSDCTKALSLIQ 91
L AI G++ G ++ SD KA+ +I
Sbjct: 143 LWAIKIGMQTVVARGYRNLIVESDSLKAIQIIN 175
>Glyma15g09420.1
Length = 825
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 8 PSLNQVALNVDGSSY-----GNPGRAGFGGLMRDHDGKWLIGFSGHVDFADSLEVELLAI 62
P V LN DGS + G+ G A GGL+RD G +L GF+ ++ EL +
Sbjct: 675 PPNGWVCLNTDGSVFENHRNGSTGSA-CGGLVRDSSGCFLGGFTVNLGITAVTLAELWGV 733
Query: 63 LHGLRIAWDIGATDV 77
+HGL++AWD+G V
Sbjct: 734 VHGLKLAWDLGCKKV 748
>Glyma11g31290.1
Length = 59
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 15/72 (20%)
Query: 11 NQVALNVDGSSYGNPGRAGFGGLMRDHDGKWLIGFSGHVDFADSLEVELLAILHGLRIAW 70
N LN DGS GNPG AG+GG A L VEL+AI GL+ AW
Sbjct: 2 NSFKLNTDGSFLGNPGNAGYGG---------------SCGIATCLLVELMAIYCGLKFAW 46
Query: 71 DIGATDVSCRSD 82
+ G ++C SD
Sbjct: 47 NKGFRVLTCESD 58
>Glyma18g49270.1
Length = 236
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 20/78 (25%)
Query: 3 VSWPAPSLNQVALNVDGSSYGNPGRAGFGGLMRDHDGKWLIGFSGHVDFADSLEVELLAI 62
V W P + LN+DG + RDH G W++GF+ L+ EL A+
Sbjct: 99 VRWEPPPATAIKLNLDG-------------IFRDHHGNWILGFTN-------LKAELFAL 138
Query: 63 LHGLRIAWDIGATDVSCR 80
+HGL AW++ ++ C
Sbjct: 139 MHGLCKAWNLRYRNIICE 156