Miyakogusa Predicted Gene

Lj6g3v1742800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1742800.1 Non Chatacterized Hit- tr|F6I2A9|F6I2A9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,65.08,0.00000000000001,SUBFAMILY NOT NAMED,NULL; STRESS ASSOCIATED
ENDOPLASMIC RETICULUM PROTEIN (SERP1/RAMP4),Endoplasmic ,CUFF.59852.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g12380.1                                                        50   5e-07
Glyma08g11040.1                                                        49   1e-06
Glyma09g01480.1                                                        49   2e-06
Glyma05g28060.1                                                        48   2e-06

>Glyma15g12380.1 
          Length = 65

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 1  MTTSRRVADRKVARFERN---SLKKGTKKGFPYPVGPIXXXXXXXXXXXXXXXQIIRNAA 57
          MTTS+R+ADRK+ARFE+N      + +KKG+ YPVGPI               QIIR A 
Sbjct: 1  MTTSKRLADRKIARFEKNISKKSSENSKKGYAYPVGPIVLGFFVFVVVGSSLFQIIRTAT 60

Query: 58 GRATA 62
           R  A
Sbjct: 61 SRGMA 65


>Glyma08g11040.1 
          Length = 96

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 6/41 (14%)

Query: 1  MTTSRRVADRKVARFERNSLKKG------TKKGFPYPVGPI 35
          MTTSRR+ADRKV +FE+N  K+G      TKKG  YPVGP+
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGFVPDTTTKKGKDYPVGPV 41


>Glyma09g01480.1 
          Length = 65

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 1  MTTSRRVADRKVARFERN---SLKKGTKKGFPYPVGPIXXXXXXXXXXXXXXXQIIRNAA 57
          MTTS+R+ADRK+ARFERN      + +KKG+ YPVGPI               QIIR A 
Sbjct: 1  MTTSKRLADRKIARFERNISKKGSESSKKGYAYPVGPIVLGFFVFVVVGSSLFQIIRTAT 60

Query: 58 GRATA 62
           R  A
Sbjct: 61 SRGMA 65


>Glyma05g28060.1 
          Length = 62

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 6/41 (14%)

Query: 1  MTTSRRVADRKVARFERNSLKKG------TKKGFPYPVGPI 35
          MTTSRR+ADRKV +FE+N  K+G      TKKG  YPVGP+
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGFVPDTTTKKGKDYPVGPV 41