Miyakogusa Predicted Gene

Lj6g3v1721640.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721640.3 tr|B9NCM8|B9NCM8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_590992 PE=4
SV=1,63.64,7e-19,seg,NULL; HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING
PROTEIN,NULL; COPPER TRANSPORT PROTEIN ATOX1-RELA,CUFF.59847.3
         (235 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g12530.2                                                       100   2e-21
Glyma15g12530.3                                                        99   3e-21
Glyma15g12530.1                                                        99   3e-21
Glyma09g01600.1                                                        98   6e-21
Glyma09g01600.2                                                        98   9e-21
Glyma17g01030.1                                                        89   4e-18
Glyma17g01030.2                                                        88   1e-17

>Glyma15g12530.2 
          Length = 232

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 52/61 (85%), Gaps = 2/61 (3%)

Query: 175 PCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGCSI 234
           PCYEGRP GPG YEYGGPM CYDGYYARPVYDSYGG RP YV NR DQYFSEENP GC I
Sbjct: 174 PCYEGRPVGPG-YEYGGPMFCYDGYYARPVYDSYGGGRPCYV-NRGDQYFSEENPQGCII 231

Query: 235 M 235
           M
Sbjct: 232 M 232



 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 53/68 (77%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDLE              +PQIRDQK+DEK+NIVFITVVCCSPEKIRDKLC KGGG
Sbjct: 8  MKLKVDLECEKCYKKVKKLLGKYPQIRDQKFDEKENIVFITVVCCSPEKIRDKLCYKGGG 67

Query: 61 TIKSIEIV 68
          +IKSIEI+
Sbjct: 68 SIKSIEIL 75


>Glyma15g12530.3 
          Length = 247

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 52/61 (85%), Gaps = 2/61 (3%)

Query: 175 PCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGCSI 234
           PCYEGRP GPG YEYGGPM CYDGYYARPVYDSYGG RP YV NR DQYFSEENP GC I
Sbjct: 189 PCYEGRPVGPG-YEYGGPMFCYDGYYARPVYDSYGGGRPCYV-NRGDQYFSEENPQGCII 246

Query: 235 M 235
           M
Sbjct: 247 M 247



 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 53/68 (77%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDLE              +PQIRDQK+DEK+NIVFITVVCCSPEKIRDKLC KGGG
Sbjct: 8  MKLKVDLECEKCYKKVKKLLGKYPQIRDQKFDEKENIVFITVVCCSPEKIRDKLCYKGGG 67

Query: 61 TIKSIEIV 68
          +IKSIEI+
Sbjct: 68 SIKSIEIL 75


>Glyma15g12530.1 
          Length = 247

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 52/61 (85%), Gaps = 2/61 (3%)

Query: 175 PCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGCSI 234
           PCYEGRP GPG YEYGGPM CYDGYYARPVYDSYGG RP YV NR DQYFSEENP GC I
Sbjct: 189 PCYEGRPVGPG-YEYGGPMFCYDGYYARPVYDSYGGGRPCYV-NRGDQYFSEENPQGCII 246

Query: 235 M 235
           M
Sbjct: 247 M 247



 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 53/68 (77%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDLE              +PQIRDQK+DEK+NIVFITVVCCSPEKIRDKLC KGGG
Sbjct: 8  MKLKVDLECEKCYKKVKKLLGKYPQIRDQKFDEKENIVFITVVCCSPEKIRDKLCYKGGG 67

Query: 61 TIKSIEIV 68
          +IKSIEI+
Sbjct: 68 SIKSIEIL 75


>Glyma09g01600.1 
          Length = 241

 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 51/61 (83%), Gaps = 2/61 (3%)

Query: 175 PCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGCSI 234
           PCY GRP GPG YEYGGPM CYDGYYARPVYDSY G RP Y  NRCDQYFSEENP GC+I
Sbjct: 183 PCYGGRPVGPG-YEYGGPMLCYDGYYARPVYDSYSGGRPCY-GNRCDQYFSEENPQGCTI 240

Query: 235 M 235
           M
Sbjct: 241 M 241



 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 53/68 (77%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDLE              +PQIRDQK+DEK+NIVFITVVCCSPEKIRDKLC KGGG
Sbjct: 8  MKLKVDLECEKCYKKVKKLLGKYPQIRDQKFDEKENIVFITVVCCSPEKIRDKLCYKGGG 67

Query: 61 TIKSIEIV 68
          +IKSIEI+
Sbjct: 68 SIKSIEIL 75


>Glyma09g01600.2 
          Length = 234

 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 51/61 (83%), Gaps = 2/61 (3%)

Query: 175 PCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGCSI 234
           PCY GRP GPG YEYGGPM CYDGYYARPVYDSY G RP Y  NRCDQYFSEENP GC+I
Sbjct: 176 PCYGGRPVGPG-YEYGGPMLCYDGYYARPVYDSYSGGRPCY-GNRCDQYFSEENPQGCTI 233

Query: 235 M 235
           M
Sbjct: 234 M 234



 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 53/68 (77%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDLE              +PQIRDQK+DEK+NIVFITVVCCSPEKIRDKLC KGGG
Sbjct: 1  MKLKVDLECEKCYKKVKKLLGKYPQIRDQKFDEKENIVFITVVCCSPEKIRDKLCYKGGG 60

Query: 61 TIKSIEIV 68
          +IKSIEI+
Sbjct: 61 SIKSIEIL 68


>Glyma17g01030.1 
          Length = 259

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 49/63 (77%), Gaps = 2/63 (3%)

Query: 174 TPCYEGRPAGPGFYEYGG-PMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGC 232
            PCYEGRP GP F  YGG P PCYD YY RPVYDSYGGSRP YV +RCD+YF EEN + C
Sbjct: 198 VPCYEGRPGGPCFDGYGGGPPPCYDAYYGRPVYDSYGGSRPCYV-SRCDEYFCEENTSAC 256

Query: 233 SIM 235
           +IM
Sbjct: 257 TIM 259



 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 49/67 (73%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          M+LKVDL+              FPQIRDQ YDEK+NIV I VVCC+PEK+RDK+CCKG G
Sbjct: 8  MRLKVDLQCHKCYKKVKKILCKFPQIRDQVYDEKNNIVTIAVVCCNPEKLRDKICCKGCG 67

Query: 61 TIKSIEI 67
          TIKSIEI
Sbjct: 68 TIKSIEI 74


>Glyma17g01030.2 
          Length = 242

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 49/63 (77%), Gaps = 2/63 (3%)

Query: 174 TPCYEGRPAGPGFYEYGG-PMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGC 232
            PCYEGRP GP F  YGG P PCYD YY RPVYDSYGGSRP YV +RCD+YF EEN + C
Sbjct: 181 VPCYEGRPGGPCFDGYGGGPPPCYDAYYGRPVYDSYGGSRPCYV-SRCDEYFCEENTSAC 239

Query: 233 SIM 235
           +IM
Sbjct: 240 TIM 242



 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 39/43 (90%)

Query: 25 QIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGGTIKSIEI 67
          +IRDQ YDEK+NIV I VVCC+PEK+RDK+CCKG GTIKSIEI
Sbjct: 15 EIRDQVYDEKNNIVTIAVVCCNPEKLRDKICCKGCGTIKSIEI 57