Miyakogusa Predicted Gene
- Lj6g3v1629990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1629990.1 Non Chatacterized Hit- tr|C6TE36|C6TE36_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,86.06,0,HIBADH:
3-hydroxyisobutyrate dehydrogenase,3-hydroxyisobutyrate dehydrogenase;
3_HYDROXYISOBUT_DH,3-,CUFF.59724.1
(329 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g02900.1 578 e-165
Glyma09g02900.2 559 e-159
Glyma15g13860.1 146 4e-35
Glyma13g42500.1 112 6e-25
Glyma07g06570.1 108 1e-23
Glyma08g03740.1 107 1e-23
Glyma16g03160.1 102 8e-22
Glyma05g35880.1 100 3e-21
Glyma05g30310.1 91 2e-18
Glyma07g11610.1 89 5e-18
Glyma13g02010.1 81 1e-15
>Glyma09g02900.1
Length = 350
Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/331 (87%), Positives = 312/331 (94%), Gaps = 2/331 (0%)
Query: 1 MAICRLRSLLSLAKCNSQ--TFQLRSFSSSQAPPHHLQNVGFIGLGNMGSRMANNLMKAG 58
MAIC+L+SLLSL+KCNS + +R+FSS+Q PP+HL+NVGFIGLGNMGSRMANNL+KAG
Sbjct: 1 MAICKLKSLLSLSKCNSALVSSSIRAFSSAQVPPNHLRNVGFIGLGNMGSRMANNLIKAG 60
Query: 59 FRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVVITMLPSSAHVIDVYTGPNGLLHG 118
FRLTVHDLNSDVL FSQMGV TK+TPYEVSEASDVVITMLP+SAHVIDVYTGPNGLLHG
Sbjct: 61 FRLTVHDLNSDVLEMFSQMGVPTKKTPYEVSEASDVVITMLPTSAHVIDVYTGPNGLLHG 120
Query: 119 GKLLRPWLLIDASTIDPQTSRNLSATISNYILKEKKGDWEIPVKLDAPVSGSVIAAEAGT 178
GKLLRPWLL+D+STIDPQTSRNLSAT++NYIL+EKKG+WE P KLDAPVSGSV AAEAGT
Sbjct: 121 GKLLRPWLLLDSSTIDPQTSRNLSATVTNYILREKKGEWEKPFKLDAPVSGSVTAAEAGT 180
Query: 179 LTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGSAAKICNNLALAVSMLGISEALALG 238
LTFMVGGSEEA+LAAKPL SMGKS IYCGGAGSGSAAKICNNLALAVSMLGISEALALG
Sbjct: 181 LTFMVGGSEEAFLAAKPLLFSMGKSAIYCGGAGSGSAAKICNNLALAVSMLGISEALALG 240
Query: 239 QSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGLMEGVPSSRDYNGGFASKLMAKDLNLAV 298
QSLGVS STLT +FNCSSARCWSSDAYNPVPGLMEGVPSS DYNGGFASKLMAKDLNLAV
Sbjct: 241 QSLGVSASTLTNIFNCSSARCWSSDAYNPVPGLMEGVPSSGDYNGGFASKLMAKDLNLAV 300
Query: 299 ESAELAGCKYPLTSEAQKIYTELCNGGHEAK 329
ESA+LAGCKYPLTS+AQKIYTELC+ GHEAK
Sbjct: 301 ESAKLAGCKYPLTSQAQKIYTELCSVGHEAK 331
>Glyma09g02900.2
Length = 343
Score = 559 bits (1441), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/331 (86%), Positives = 306/331 (92%), Gaps = 9/331 (2%)
Query: 1 MAICRLRSLLSLAKCNSQ--TFQLRSFSSSQAPPHHLQNVGFIGLGNMGSRMANNLMKAG 58
MAIC+L+SLLSL+KCNS + +R+FSS+Q NVGFIGLGNMGSRMANNL+KAG
Sbjct: 1 MAICKLKSLLSLSKCNSALVSSSIRAFSSAQ-------NVGFIGLGNMGSRMANNLIKAG 53
Query: 59 FRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVVITMLPSSAHVIDVYTGPNGLLHG 118
FRLTVHDLNSDVL FSQMGV TK+TPYEVSEASDVVITMLP+SAHVIDVYTGPNGLLHG
Sbjct: 54 FRLTVHDLNSDVLEMFSQMGVPTKKTPYEVSEASDVVITMLPTSAHVIDVYTGPNGLLHG 113
Query: 119 GKLLRPWLLIDASTIDPQTSRNLSATISNYILKEKKGDWEIPVKLDAPVSGSVIAAEAGT 178
GKLLRPWLL+D+STIDPQTSRNLSAT++NYIL+EKKG+WE P KLDAPVSGSV AAEAGT
Sbjct: 114 GKLLRPWLLLDSSTIDPQTSRNLSATVTNYILREKKGEWEKPFKLDAPVSGSVTAAEAGT 173
Query: 179 LTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGSAAKICNNLALAVSMLGISEALALG 238
LTFMVGGSEEA+LAAKPL SMGKS IYCGGAGSGSAAKICNNLALAVSMLGISEALALG
Sbjct: 174 LTFMVGGSEEAFLAAKPLLFSMGKSAIYCGGAGSGSAAKICNNLALAVSMLGISEALALG 233
Query: 239 QSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGLMEGVPSSRDYNGGFASKLMAKDLNLAV 298
QSLGVS STLT +FNCSSARCWSSDAYNPVPGLMEGVPSS DYNGGFASKLMAKDLNLAV
Sbjct: 234 QSLGVSASTLTNIFNCSSARCWSSDAYNPVPGLMEGVPSSGDYNGGFASKLMAKDLNLAV 293
Query: 299 ESAELAGCKYPLTSEAQKIYTELCNGGHEAK 329
ESA+LAGCKYPLTS+AQKIYTELC+ GHEAK
Sbjct: 294 ESAKLAGCKYPLTSQAQKIYTELCSVGHEAK 324
>Glyma15g13860.1
Length = 224
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/78 (88%), Positives = 73/78 (93%)
Query: 29 QAPPHHLQNVGFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFSQMGVSTKETPYEV 88
+ PP HLQNVGFIGLGNMGSRMANNL+KAGFRLTVHDLNSDVL FSQMGV TK+TPYEV
Sbjct: 35 EVPPRHLQNVGFIGLGNMGSRMANNLIKAGFRLTVHDLNSDVLEMFSQMGVPTKKTPYEV 94
Query: 89 SEASDVVITMLPSSAHVI 106
SEASDVVITMLP+SAHVI
Sbjct: 95 SEASDVVITMLPNSAHVI 112
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/67 (94%), Positives = 66/67 (98%)
Query: 263 DAYNPVPGLMEGVPSSRDYNGGFASKLMAKDLNLAVESAELAGCKYPLTSEAQKIYTELC 322
DAYNPVPGLMEGVPSSRDYNGGFASKLMAKDLNLAVESA+LAGCKYPLTS+AQKIYTELC
Sbjct: 139 DAYNPVPGLMEGVPSSRDYNGGFASKLMAKDLNLAVESAKLAGCKYPLTSQAQKIYTELC 198
Query: 323 NGGHEAK 329
+ GHEAK
Sbjct: 199 SVGHEAK 205
>Glyma13g42500.1
Length = 276
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 132/284 (46%), Gaps = 45/284 (15%)
Query: 37 NVGFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVVI 96
+GF+GLG MGS MA+NL+KAG+ K +P EV+ + DV
Sbjct: 6 RIGFLGLGIMGSPMAHNLLKAGY----------------------KPSPEEVAASCDVTF 43
Query: 97 TMLPSSAHVIDVYTGPNGLLHGGKLLRPWLLIDASTIDPQTSRNLSATISNYILKEKKGD 156
ML +DV G +G +G + + +D ST+D TS+ + N +K
Sbjct: 44 AMLADPQSAVDVACGKHGAANGMGPGKGY--VDVSTVDGDTSK-----LINGHMKSTGAL 96
Query: 157 WEIPVKLDAPVSGSVIAAEAGTLTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGSAA 216
+ L+APVSGS AE G L F+ G + Y A L MGKS Y G G+G+A
Sbjct: 97 F-----LEAPVSGSKKPAEDGQLIFLTAGDKNLYEAVGSLLDIMGKSKFYLGDVGNGAAM 151
Query: 217 KICNNLALAVSMLGISEALALGQSLGVSPSTLTKVFN--CSSARCWSSDAYNPVPGLMEG 274
K+ N+ + M SE L L + +G+ P L +V + SA +S+ P +++
Sbjct: 152 KLVVNMIMGSMMASFSEGLLLSEKVGLDPDVLVQVVSQGAISAPMYSTKG----PSMIQS 207
Query: 275 VPSSRDYNGGFASKLMAKDLNLAVESAELAGCKYPLTSEAQKIY 318
+ Y F K KDL LA+ AE P+ S A ++Y
Sbjct: 208 L-----YPTAFPLKHQQKDLRLALGLAESVSQPTPIASAANELY 246
>Glyma07g06570.1
Length = 290
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 39 GFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVVITM 98
GF+GLG MG MA NL++ GF++T+ + ++ Q G S ETP V + I M
Sbjct: 4 GFLGLGIMGKAMAINLLRHGFKVTIWNRTLSKCDELVQHGASVGETPATVVKKCKYTIAM 63
Query: 99 LPSSAHVIDVYTGPNGLLHGGKLLRPWLLIDASTIDPQTSRNLSATISNYILKEKKGDWE 158
L + + V +G+L + ID ST+D TS +S TI K K G +
Sbjct: 64 LSDPSAALSVVFDKDGVLEH---INGKCYIDMSTVDADTSSKISETI-----KAKGGYF- 114
Query: 159 IPVKLDAPVSGSVIAAEAGTLTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGSAAKI 218
L+APVSGS AE G L + G + Y P F +GK + + G G+G+ K+
Sbjct: 115 ----LEAPVSGSKKPAEDGQLIILAAGDKALYDEVLPAFDVLGKKSFFLGEVGNGAKMKL 170
Query: 219 CNNLALAVSMLGISEALALGQSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGLMEGVPSS 278
N+ + M SE L L + G++P TL V + + N + L
Sbjct: 171 VVNMIMGSMMNAFSEGLTLAERSGLNPGTLLDVLDLGAIS-------NGMFKLKGPTMLQ 223
Query: 279 RDYNGGFASKLMAKDLNLAVESAELAGCKYPLTSEAQKIYTE 320
Y+ F K KD+ LA+ + P+ + A + + +
Sbjct: 224 NSYSPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKK 265
>Glyma08g03740.1
Length = 336
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 146/321 (45%), Gaps = 28/321 (8%)
Query: 6 LRSLLSLAKCNSQTFQLRSFSSSQAPPHHLQN--VGFIGLGNMGSRMANNLMKAGFRLTV 63
L++L SL + T +R F ++ P N VG+IG G MG M +L++AG+ LTV
Sbjct: 9 LQTLRSLHR-RIHTSIVRHFMAAAEPIISSSNTRVGWIGTGVMGQSMCAHLIRAGYTLTV 67
Query: 64 HDLNSDVLNKFSQMGVSTKETPYEVSEASDVVITMLPSSAHVIDVYTGPNGLLHGGKL-- 121
+ +G +P+ V+ SDVV T++ + V V P+ G L
Sbjct: 68 FNRTPSKAQPLLDLGAHFAPSPHAVAANSDVVFTIVGYPSDVRSVLLHPS----SGALSA 123
Query: 122 LRP-WLLIDASTIDPQTSRNLSATISNYILKEKKGDWEIPVKLDAPVSGSVIAAEAGTLT 180
LRP +L+D +T +P + ++A KG I DAPVSG A+ GTL
Sbjct: 124 LRPGGVLVDMTTSEPSLATEIAAA------AAAKGCHSI----DAPVSGGDRGAKNGTLA 173
Query: 181 FMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGSAAKICNNLALAVSMLGISEALALGQS 240
GG E +PLFS +GK Y GG+G G AK+ N + +A +M+G+ E +
Sbjct: 174 IFAGGEEATVKRLEPLFSHLGKVK-YMGGSGKGQFAKLANQVTIASTMVGLVEGMVYAHK 232
Query: 241 LGVSPSTLTKVFNCSSARCWSSDAYNPVPGLMEGVPSSRDYNGGFASKLMAKDLNLAVES 300
G+ + +A S D Y +RD + GF KDL + ++
Sbjct: 233 AGLDVGLYLDAISTGAAGSKSLDLYGK-------RILNRDLDPGFFVNHFVKDLGICLKE 285
Query: 301 AELAGCKYPLTSEAQKIYTEL 321
+ G P + AQ++Y L
Sbjct: 286 CQNMGIALPGLALAQQLYVSL 306
>Glyma16g03160.1
Length = 290
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 20/283 (7%)
Query: 38 VGFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVVIT 97
VGF+GLG MG MA NL++ GF++TV + ++ Q G S ETP V + I
Sbjct: 3 VGFLGLGIMGKAMAINLLRHGFKVTVWNRTLSKCDELVQHGASVGETPATVVKKCKYTIA 62
Query: 98 MLPSSAHVIDVYTGPNGLLHGGKLLRPWLLIDASTIDPQTSRNLSATISNYILKEKKGDW 157
ML + + V +G+L + + ID ST++ TS +S I K K G +
Sbjct: 63 MLSDPSAALSVVFDNDGVL---EHINGKGYIDMSTVNADTSSKISEAI-----KAKGGYF 114
Query: 158 EIPVKLDAPVSGSVIAAEAGTLTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGSAAK 217
L+ PVSGS AE G L + G + Y P F +GK + + G G+G+ K
Sbjct: 115 -----LEGPVSGSKKPAEDGQLIILAAGHKALYDEVLPAFDILGKKSFFLGEVGNGAKMK 169
Query: 218 ICNNLALAVSMLGISEALALGQSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGLMEGVPS 277
+ N+ + M SE + L + G++P TL V + + P +++
Sbjct: 170 LVVNMIMGSMMNAFSEGITLAERSGLNPGTLLDVLDLGAISNGMFKLKGPT--MLQ---- 223
Query: 278 SRDYNGGFASKLMAKDLNLAVESAELAGCKYPLTSEAQKIYTE 320
Y+ F K KD+ LA+ + P+ + A + + +
Sbjct: 224 -NSYSPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKK 265
>Glyma05g35880.1
Length = 310
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 23/287 (8%)
Query: 37 NVGFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVVI 96
VG+IG G MG M +L++AG+ LTV + +G +P+ V+ SDVV
Sbjct: 14 RVGWIGTGVMGQSMCAHLIRAGYTLTVFNRTPSKAQPLLDLGAYFAPSPHAVAARSDVVF 73
Query: 97 TMLPSSAHVIDVYTGP-NGLLHGGKLLRP-WLLIDASTIDPQTSRNLSATISNYILKEKK 154
+++ + V V P +G L LRP +L+D +T +P +L+ I++ K
Sbjct: 74 SIVGYPSDVRSVLLHPSSGALSA---LRPGGVLVDMTTSEP----SLAVEIADA--ATAK 124
Query: 155 GDWEIPVKLDAPVSGSVIAAEAGTLTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAGSGS 214
G I DAPVSG A+ GTL GG E + LFS +GK Y GG+G G
Sbjct: 125 GCHSI----DAPVSGGDRGAKNGTLAIFAGGEESTVKRMEALFSHLGKVN-YMGGSGKGQ 179
Query: 215 AAKICNNLALAVSMLGISEALALGQSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGLMEG 274
AK+ N + +A +M+G+ E + G+ + +A S D Y
Sbjct: 180 FAKLANQVTIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLDLYGK------- 232
Query: 275 VPSSRDYNGGFASKLMAKDLNLAVESAELAGCKYPLTSEAQKIYTEL 321
+RD GF KDL + ++ + G P + AQ++Y L
Sbjct: 233 RILNRDLEPGFFVNHFVKDLGICLKECQNMGIALPGLALAQQLYVSL 279
>Glyma05g30310.1
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 31/272 (11%)
Query: 37 NVGFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFS--QMGVSTKETPYEVSEASDV 94
+G+IG+G MG MA+ L+ AG+ L+ + N N S G + ++P ++++ SDV
Sbjct: 15 RIGWIGIGVMGFAMASRLLSAGYTLSFYARNPSNPNALSLQSQGATLAQSPAQLAQLSDV 74
Query: 95 VITMLPSSAHVIDVYTGPNGLLHGGKL--LRP-WLLIDASTIDPQTSRNLSATISNYILK 151
+ TM+ H DV + LL L LRP +++D ++ P +R + +
Sbjct: 75 LFTMV---GHPSDVRSL---LLDSPVLSSLRPNSVVVDTTSSHPDLARQI------FSAA 122
Query: 152 EKKGDWEIPVKLDAPVSGSVIAAEAGTLTFMVGGSEEAYLAAKPLFSSMGKSTIYCGGAG 211
W + DAPVSG I A G L + G + PLFS +G++T Y G AG
Sbjct: 123 RSLDAWSV----DAPVSGGDIGARDGKLAILAAGEKAVVEWLSPLFSILGRAT-YMGPAG 177
Query: 212 SGSAAKICNNLALAVSMLGISEALALGQSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGL 271
G + KI N + + +++G+SE L + G+ + +A + + + +
Sbjct: 178 CGQSCKIANQITIGANLIGLSEGLVFAKRAGLDLREFVEAIKDGAAGSKALELFGER--M 235
Query: 272 MEGVPSSRDYN-GGFASKLMAKDLNLAVESAE 302
+E RD+ GGFA + KDL + V+ E
Sbjct: 236 IE-----RDFRPGGFA-EYQVKDLGMGVDVVE 261
>Glyma07g11610.1
Length = 1214
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 22/286 (7%)
Query: 36 QNVGFIGLGNMGSRMANNLMKAGFRLTVHDLNSDVLNKFSQMGVSTKETPYEVSEASDVV 95
+ VGFIGLG MG MA +L+ + F + D+ L +FS G +P EVS+ +DV+
Sbjct: 170 RRVGFIGLGAMGFGMATHLLSSKFCVVGFDVYKPTLTRFSNAGGLIGNSPAEVSKDADVL 229
Query: 96 ITMLPSSAHVIDVYTGPNGLLHGGKLLRP-WLLIDASTIDPQTSRNLSATISNYILKEKK 154
I M+ + A V G G + L P +I +ST+ P L + N E K
Sbjct: 230 IIMVTNEAQAESVLYGEYGAVSA---LPPGATIILSSTVSPAYVSQLEHRLHN----EGK 282
Query: 155 GDWEIPVKL-DAPVSGSVIAAEAGTLTFMVGGSEEAYLAAKPLFSSMG-KSTIYCGGAGS 212
+KL DAPVSG V+ A GTLT M G+++A +A + +++ K I GG G+
Sbjct: 283 N-----LKLVDAPVSGGVVRASMGTLTIMASGTDDALKSAGLVLAALSEKLYIIKGGCGA 337
Query: 213 GSAAKICNNLALAVSMLGISEALALGQSLGVSPSTLTKVFNCSSARCWSSDAYNPVPGLM 272
GS K+ N L V + +EA+A LG++ L S W + N ++
Sbjct: 338 GSGVKMINQLLAGVQIASAAEAIAFAARLGLNTRLLFDFIATSGGTSWMFE--NRGQHMI 395
Query: 273 EGVPSSRDYNGGFASKLMAKDLNLAVESAELAGCKYPLTSEAQKIY 318
+ DY A + KDL + + L++ A ++Y
Sbjct: 396 D-----NDYTPCSALDIFVKDLGIVTRESSSWKVPLQLSTIAHQLY 436
>Glyma13g02010.1
Length = 106
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 43/48 (89%)
Query: 215 AAKICNNLALAVSMLGISEALALGQSLGVSPSTLTKVFNCSSARCWSS 262
AAKI NNLALAV MLGISEALALGQSLGVS STLT +FNCSSA CWSS
Sbjct: 9 AAKIYNNLALAVCMLGISEALALGQSLGVSASTLTNLFNCSSANCWSS 56