Miyakogusa Predicted Gene

Lj6g3v1629810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1629810.1 Non Chatacterized Hit- tr|K4A512|K4A512_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si033906,32.02,5e-19,HELICASE-RELATED,NULL; dsRNA_bind,Dicer
double-stranded RNA-binding fold; DICER_DSRBF,Dicer
double-s,NODE_66160_length_585_cov_47.982906.path1.1
         (184 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g02930.1                                                       239   8e-64
Glyma09g02920.1                                                       233   7e-62
Glyma08g27800.1                                                       167   7e-42
Glyma19g44390.1                                                       117   8e-27
Glyma19g44390.2                                                       117   8e-27

>Glyma09g02930.1 
          Length = 1414

 Score =  239 bits (611), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 111/175 (63%), Positives = 137/175 (78%)

Query: 1   MLKNIACLEACKQLHKIGALTDKLVPDIXXXXXXXXXFGSEPYDEKQPSYVPRELVNQVL 60
           +LKNIACLEACKQLHKIGAL+D LVPDI          G+EPYDE QP++VP  LVN V 
Sbjct: 612 ILKNIACLEACKQLHKIGALSDNLVPDIVMEEAEVEELGNEPYDENQPTFVPFGLVNSVS 671

Query: 61  KHGETTYHCYLIELKQNFSYDITVQNIYLATRVELNREIASMQFDMGFDKGSLSVSFIHK 120
            + +T YHCY +E    FSYD++VQ+I+L  R+EL+ EI  MQFDMGFD+GSLSV+F +K
Sbjct: 672 NNSQTVYHCYFMEFNNKFSYDVSVQDIFLLMRIELDPEIGCMQFDMGFDRGSLSVNFRYK 731

Query: 121 GAIHLSPDMVSLCKRFQVTILRILLDHNMDRLQTALEKCCLEDGLEIDYLLLPSM 175
           G I+LSPD V LCK+FQVTILRIL+DH+M++L   L++C LED LEIDYLLLP+M
Sbjct: 732 GTINLSPDQVLLCKKFQVTILRILIDHDMNKLTAGLDRCYLEDDLEIDYLLLPAM 786


>Glyma09g02920.1 
          Length = 1305

 Score =  233 bits (595), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 139/174 (79%)

Query: 2   LKNIACLEACKQLHKIGALTDKLVPDIXXXXXXXXXFGSEPYDEKQPSYVPRELVNQVLK 61
           LKNIACLEACKQLHKIGALTD LVPDI         FG+EPYDE QP++VP  LVN V  
Sbjct: 530 LKNIACLEACKQLHKIGALTDNLVPDIVIEEAEVEEFGNEPYDENQPTFVPFGLVNSVSN 589

Query: 62  HGETTYHCYLIELKQNFSYDITVQNIYLATRVELNREIASMQFDMGFDKGSLSVSFIHKG 121
           +  T YHCYL+EL QNFSYDI+VQ+I+LA R+EL+ EI   QFDMGFD+GS+S+   +KG
Sbjct: 590 NSHTIYHCYLMELSQNFSYDISVQDIFLAIRIELDPEIGCTQFDMGFDRGSVSLKLRYKG 649

Query: 122 AIHLSPDMVSLCKRFQVTILRILLDHNMDRLQTALEKCCLEDGLEIDYLLLPSM 175
            I+LSP++V LCK+FQVT+L  ++DH+M++L T+L+KC LED +EIDYLLLP++
Sbjct: 650 TINLSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDKCYLEDNVEIDYLLLPAI 703


>Glyma08g27800.1 
          Length = 595

 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/188 (50%), Positives = 118/188 (62%), Gaps = 34/188 (18%)

Query: 1   MLKNIACLEACKQLHKIGALTDKLVPDIXXXXXXXXXFGSEPYDEKQPSYVPRELVNQVL 60
           +LKNIACLEACKQLHKIGAL+D LVPDI                           V +  
Sbjct: 216 LLKNIACLEACKQLHKIGALSDNLVPDI---------------------------VIEEA 248

Query: 61  KHGETTYHCYLIELKQNFSYDITVQNIYLATRVELNREIASMQFDMGFDKGSLS----VS 116
           K  E  YHCYLIE  Q+FSYD++VQ+I+L  R+EL+ +I  MQFDMGFD+G LS    + 
Sbjct: 249 KVEEFVYHCYLIEFNQHFSYDVSVQDIFLLIRIELDPKIGCMQFDMGFDRGMLSNCPLIV 308

Query: 117 FIHKGAIHLSPDMVSLCKRFQVTILRILLDHNMDRLQTALEKCCLEDGLEIDYLLLPSMV 176
           F    ++  S   V LCK+F VTIL IL+DHNM++L T L+KC LED LEIDYLLLP++ 
Sbjct: 309 FDISASVKKS---VLLCKKFHVTILIILIDHNMNKLTTGLDKCYLEDDLEIDYLLLPALG 365

Query: 177 NEQGPTID 184
             Q   ++
Sbjct: 366 KRQYAAVN 373


>Glyma19g44390.1 
          Length = 788

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 86/144 (59%), Gaps = 2/144 (1%)

Query: 41  EPYDEKQPSYVPRELVNQVLKHGETTYHCYLIELKQNFSYDITVQNIYLATRVELNREIA 100
           E +    PSYVP ELV+   K    TYHCYL+EL+Q++ Y ++V +I LA R EL+ EI 
Sbjct: 2   EGFGNAYPSYVPSELVSCSSKGRNVTYHCYLMELEQHYEYQVSVNDIVLAIRSELDSEIV 61

Query: 101 SMQFDMGFD--KGSLSVSFIHKGAIHLSPDMVSLCKRFQVTILRILLDHNMDRLQTALEK 158
                  FD  +G L V+  H   I LSP+ V  C+RFQ T+ RILL+ ++ +L +  + 
Sbjct: 62  DTLSGTSFDVKRGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVSDD 121

Query: 159 CCLEDGLEIDYLLLPSMVNEQGPT 182
             L D  EID+LLLP+ V  Q P+
Sbjct: 122 FSLGDNPEIDFLLLPATVKHQRPS 145


>Glyma19g44390.2 
          Length = 756

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 86/144 (59%), Gaps = 2/144 (1%)

Query: 41  EPYDEKQPSYVPRELVNQVLKHGETTYHCYLIELKQNFSYDITVQNIYLATRVELNREIA 100
           E +    PSYVP ELV+   K    TYHCYL+EL+Q++ Y ++V +I LA R EL+ EI 
Sbjct: 2   EGFGNAYPSYVPSELVSCSSKGRNVTYHCYLMELEQHYEYQVSVNDIVLAIRSELDSEIV 61

Query: 101 SMQFDMGFD--KGSLSVSFIHKGAIHLSPDMVSLCKRFQVTILRILLDHNMDRLQTALEK 158
                  FD  +G L V+  H   I LSP+ V  C+RFQ T+ RILL+ ++ +L +  + 
Sbjct: 62  DTLSGTSFDVKRGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVSDD 121

Query: 159 CCLEDGLEIDYLLLPSMVNEQGPT 182
             L D  EID+LLLP+ V  Q P+
Sbjct: 122 FSLGDNPEIDFLLLPATVKHQRPS 145