Miyakogusa Predicted Gene

Lj6g3v1629770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1629770.1 tr|G7IKX1|G7IKX1_MEDTR Endoribonuclease Dicer
OS=Medicago truncatula GN=MTR_2g030490 PE=4
SV=1,72.22,0.000000000001,no description,NULL; HELICASE-RELATED,NULL;
P-loop containing nucleoside triphosphate
hydrolases,NUL,NODE_57511_length_371_cov_17.010782.path2.1
         (52 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g02930.1                                                        73   6e-14
Glyma15g13890.1                                                        69   1e-12

>Glyma09g02930.1 
          Length = 1414

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 7/58 (12%)

Query: 2  VEEALPMELDNQ-------VVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
          +EE LP+E+D+        +  D L FARSYQ+EALD AIRENTIV+L+TGSGKTLIA
Sbjct: 1  MEEVLPVEMDSNTQQQQKVISADVLSFARSYQLEALDNAIRENTIVYLETGSGKTLIA 58


>Glyma15g13890.1 
          Length = 285

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 5/56 (8%)

Query: 2  VEEALPMELDN-----QVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
          +EE L +E+D+     ++  D LPFA SYQ+EALD AIRENTIV+L+TGSGKTLIA
Sbjct: 1  MEEVLSLEVDSNTQQQKITADVLPFAGSYQLEALDNAIRENTIVYLETGSGKTLIA 56