Miyakogusa Predicted Gene
- Lj6g3v1629660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1629660.1 tr|Q9LT74|Q9LT74_ARATH Similarity to late
embryogenesis abundant protein OS=Arabidopsis thaliana
GN=,52.86,0.000000001,Root_cap,Root cap; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.59710.1
(369 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g35710.1 248 1e-65
Glyma13g35720.1 243 3e-64
Glyma12g34880.1 236 2e-62
Glyma12g34870.1 234 1e-61
Glyma06g38530.1 231 8e-61
Glyma11g20710.1 226 4e-59
Glyma11g20700.1 226 4e-59
Glyma12g07350.1 220 2e-57
Glyma12g07360.1 146 3e-35
Glyma06g38550.1 118 1e-26
Glyma12g17420.1 75 8e-14
>Glyma13g35710.1
Length = 334
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 175/300 (58%), Gaps = 19/300 (6%)
Query: 88 RCYNTEHVCPAACPGP---------CEVDCN--TCKPVC-----HCDRPGAVCQDPRFIG 131
RCY CPA CP C+++CN TCK VC +C+ PG+ C DPRFIG
Sbjct: 36 RCYGKYITCPAECPNSETNNPKTKVCQIECNKPTCKAVCRSRKPNCNAPGSGCYDPRFIG 95
Query: 132 GDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFTWVQSIAILFDHHQLFVG 191
GDG FYFHGK + +F LVSD NL INA FIG R RD+TW+Q++ ILF+ +
Sbjct: 96 GDGRVFYFHGKTNEHFSLVSDSNLQINARFIGHRPEGRSRDYTWIQALGILFNSKSFSLE 155
Query: 192 AEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKSS--GVSIHRDADTNSIVVEVEGKFR 249
A KT W D D +++ + L + + W S + + R A NS++V V+
Sbjct: 156 ATKTPQWNDELDHFKFTYNENQVALAEGSLSTWHSEEKDIKVERVASKNSVMVTVKDVAE 215
Query: 250 MTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLGQTYKPDYVSRVNV 309
+ V+PIT+E+ RIH Y + +DCFAHL+V FRFF+LS +V GVLG+TY+ D+ +
Sbjct: 216 ILVNVVPITKEDDRIHNYQVPSDDCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKP 275
Query: 310 GAKMPVMGGAGKEFQTTSLFTPDCSVARFVGSNNDEVVTLEMPAMNCVSGIDGQGVVCRR 369
G MPV+GG K ++T SL +PDC F ++ E T+E ++C +G G+VCR+
Sbjct: 276 GVAMPVVGGEDK-YRTNSLLSPDCVSCVFSQESSAEKETMEYGTLDCTKFSNGLGIVCRK 334
>Glyma13g35720.1
Length = 346
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 175/312 (56%), Gaps = 31/312 (9%)
Query: 88 RCYNTEHVCPAACPGP---------CEVDCN--TCKPVC-----------------HCDR 119
RCY CPA CP C+++CN TCK VC +C+
Sbjct: 36 RCYGKYITCPAECPNSETNNPKTKVCQIECNKPTCKAVCRISPHVINYSQRLSARPNCNA 95
Query: 120 PGAVCQDPRFIGGDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFTWVQSI 179
PG+ C DPRFIGGDG FYFHGK + +F LVSD NL INA FIG R RD+TW+Q++
Sbjct: 96 PGSGCYDPRFIGGDGRVFYFHGKTNEHFSLVSDSNLQINARFIGHRPEGRSRDYTWIQAL 155
Query: 180 AILFDHHQLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKSS--GVSIHRDADT 237
ILF+ + A KT W D D +++ + L + + W S + + R A
Sbjct: 156 GILFNSKSFSLEATKTPQWNDELDHFKFTYNENQVALAEGSLSTWHSEEKDIKVERVASK 215
Query: 238 NSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLGQ 297
NS++V V+ + V+PIT+E+ RIH Y + +DCFAHL+V FRFF+LS +V GVLG+
Sbjct: 216 NSVMVTVKDVAEILVNVVPITKEDDRIHNYQVPSDDCFAHLEVQFRFFALSQKVDGVLGR 275
Query: 298 TYKPDYVSRVNVGAKMPVMGGAGKEFQTTSLFTPDCSVARFVGSNNDEVVTLEMPAMNCV 357
TY+ D+ + G MPV+GG K ++T SL +PDC F ++ E T+E ++C
Sbjct: 276 TYRLDFENPAKPGVAMPVVGGEDK-YRTNSLLSPDCVSCVFSQESSAEKETMEYGTLDCT 334
Query: 358 SGIDGQGVVCRR 369
+G G+VCR+
Sbjct: 335 KFSNGLGIVCRK 346
>Glyma12g34880.1
Length = 339
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 175/305 (57%), Gaps = 24/305 (7%)
Query: 88 RCYNTEHVCPAACPGP---------CEVDCN--TCKPVC-----HCDRPGAVCQDPRFIG 131
RCY CPA CP C++DCN CK VC +C+ PG+ C DPRFIG
Sbjct: 36 RCYGKHITCPAECPDSETNNPKTKVCQIDCNKPICKAVCRSRKPNCNAPGSGCYDPRFIG 95
Query: 132 GDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFTWVQSIAILFDHHQLFVG 191
GDG FYFHGK + +F LVSD NL +NA FIG R RD+TW+Q++ ILF+ +
Sbjct: 96 GDGRVFYFHGKTNEHFTLVSDSNLQMNARFIGHRPEGRSRDYTWIQALGILFNSKTFSLE 155
Query: 192 AEKTATWEDSNDRLALSFDGEPITLHKSEGAMW--KSSGVSIHRDADTNSIVVEVEGKFR 249
A KT W D D +++G + L + + W + + + R A NS++V ++
Sbjct: 156 ATKTPQWNDELDHFKFTYNGNQVALAEGSLSTWYTEERDIKVERVASKNSVMVTLKDVAE 215
Query: 250 MTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLGQTYKPDYVSRVNV 309
+ V+PIT+E+ RIH Y + +DCFAHL+V FRFF+LS +V GVLG+TY+ D+ +
Sbjct: 216 ILVNVVPITKEDDRIHNYQVPSDDCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKP 275
Query: 310 GAKMPVMGGAGKEFQTTSLFTPDCSVARFV-GSNNDEVVT----LEMPAMNCVSGIDGQG 364
G MPV+GG K ++T SL +P C F GS+ ++ T +E ++C G G
Sbjct: 276 GVAMPVVGGEDK-YRTNSLLSPHCGSCVFSQGSSTEKETTPQQVMEYGTLDCTKFSYGLG 334
Query: 365 VVCRR 369
+VCR+
Sbjct: 335 IVCRK 339
>Glyma12g34870.1
Length = 339
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 174/305 (57%), Gaps = 24/305 (7%)
Query: 88 RCYNTEHVCPAACPGP---------CEVDCN--TCKPVC-----HCDRPGAVCQDPRFIG 131
RCY CPA CP C++DCN CK VC +C+ PG+ C DPRFIG
Sbjct: 36 RCYGKHITCPAECPDSETNNPKTKVCQIDCNKPICKAVCRSRKPNCNAPGSGCYDPRFIG 95
Query: 132 GDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFTWVQSIAILFDHHQLFVG 191
GDG FYFHGK + +F LVSD NL +NA FIG R RD+TW+Q++ ILF+ +
Sbjct: 96 GDGRVFYFHGKTNEHFTLVSDSNLQMNARFIGHRPEGRSRDYTWIQALGILFNSKTFSLE 155
Query: 192 AEKTATWEDSNDRLALSFDGEPITLHKSEGAMW--KSSGVSIHRDADTNSIVVEVEGKFR 249
A KT W D D +++G + L + + W + + + R A N ++V ++
Sbjct: 156 ATKTPQWNDELDHFKFTYNGNQVALAEGSLSTWYTEEKDIKVERVASKNGVMVTLKDVAE 215
Query: 250 MTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLGQTYKPDYVSRVNV 309
+ V+PIT+E+ RIH Y + +DCFAHL+V FRFF+LS +V GVLG+TY+ D+ +
Sbjct: 216 ILVNVVPITKEDDRIHNYQVPSDDCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKP 275
Query: 310 GAKMPVMGGAGKEFQTTSLFTPDC-SVARFVGSNNDEVVT----LEMPAMNCVSGIDGQG 364
G MPV+GG K ++T SL +P C S GS+ ++ T +E ++C G G
Sbjct: 276 GVAMPVVGGEDK-YRTNSLLSPHCGSCVYSQGSSTEKETTPQQVMEYGTLDCTKFSYGLG 334
Query: 365 VVCRR 369
+VCR+
Sbjct: 335 IVCRK 339
>Glyma06g38530.1
Length = 340
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 183/316 (57%), Gaps = 24/316 (7%)
Query: 76 KEKAKCKNKKFPRCYNTEHVCPAACP---------GPCEVDCN--TCKPVCHCDRP---- 120
K+ C ++ P C+ + CP+ CP C +DC+ TC+ C +P
Sbjct: 27 KDTLTCPFRRSP-CFGKKVQCPSQCPLQSPSDPKAKVCNLDCDSPTCETKCKTRKPNCNG 85
Query: 121 -GAVCQDPRFIGGDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFTWVQSI 179
G+ C DPRF+G DGI FYFHG+++ NF LVSD NL INA FIG R RD+TW+Q++
Sbjct: 86 RGSACLDPRFVGADGIVFYFHGRRNENFALVSDANLQINARFIGLRPATRTRDYTWIQAL 145
Query: 180 AILFDHHQLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWK--SSGVSIHRDADT 237
IL+ HQ + A + TW+D D L S +G + + S + W+ + + I R +
Sbjct: 146 GILYGSHQFTIEATPSPTWDDEIDHLKFSHNGNELVIPDSFLSTWQCPENKLRIERTSSK 205
Query: 238 NSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLGQ 297
NS+ + ++ ++ V+P+T+E+SRIH Y I ++DCFAHL+V F+F LS++V GVLG+
Sbjct: 206 NSVSITLQEVADISINVVPVTKEDSRIHNYQIPDDDCFAHLEVQFKFHGLSNKVEGVLGK 265
Query: 298 TYKPDYVSRVNVGAKMPVMGGAGKEFQTTSLFTPDCSVARF---VGSNNDEVVTLEMPAM 354
TY+PD+ + +G MPV+GG + ++TTSL + DC V F GS E +
Sbjct: 266 TYQPDFQNPAKLGVAMPVVGGEDR-YRTTSLVSADCGVCLFDAREGSEKKMNSESEYGVL 324
Query: 355 NCVSGID-GQGVVCRR 369
+C + G G+VCRR
Sbjct: 325 DCTGAANSGNGIVCRR 340
>Glyma11g20710.1
Length = 404
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 24/293 (8%)
Query: 64 VNCATCKPVCIPKEKAKCKNKKFPRCYNTEHVCPAACP----------GPCEVDCN--TC 111
N P+ +E+ C+ K C VCP+ C C +DC+ TC
Sbjct: 92 TNYDKLSPLPTGQERGFCR--KNTACEFKTIVCPSECAFRKPKKNKKQKACFIDCSSSTC 149
Query: 112 KPVC-----HCDRPGAVCQDPRFIGGDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRN 166
+ C +CD G++C DPRF+GGDG+ FYFHG K NF +VSD INAHFIG R
Sbjct: 150 EATCKVRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDNEFQINAHFIGTRP 209
Query: 167 HNMKRDFTWVQSIAILFDHHQLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKS 226
RD+TWVQ++A++FD H L + A + + W+D D L + +D EP+ + A W++
Sbjct: 210 QGRTRDYTWVQALAVMFDTHTLVIAANRVSHWDDKVDSLIVKWDDEPVNIPTDGEAEWRA 269
Query: 227 SG----VSIHRDADTNSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGF 282
+G V + R DTNS+ V + G + V PI E+E++IH Y + +D FAHL+ F
Sbjct: 270 NGDEREVVVERTDDTNSVRVTISGLVELDISVKPIGEQENKIHNYQLPSDDAFAHLETQF 329
Query: 283 RFFSLSSEVSGVLGQTYKPDYVSRVNVGAKMPVMGGAGKEFQTTSLFTPDCSV 335
RF + GVLGQTY+P YVS V G MP+MGG K +QT SLF+ C++
Sbjct: 330 RFKKSTDNFEGVLGQTYRPGYVSPVKRGVPMPMMGGENK-YQTLSLFSTSCNL 381
>Glyma11g20700.1
Length = 403
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 167/296 (56%), Gaps = 24/296 (8%)
Query: 64 VNCATCKPVCIPKEKAKCKNKKFPRCYNTEHVCPAACP----------GPCEVDCN--TC 111
N P+ +E+ C+ K C VCP+ C C +DC+ TC
Sbjct: 95 TNYDKLSPLPTGQERGFCR--KNTACEFKTIVCPSECAYRKPKKNKKQKACFIDCSSSTC 152
Query: 112 KPVC-----HCDRPGAVCQDPRFIGGDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRN 166
+ C +CD GA+C DPRF+GGDG+ FYFHG K NF +VSD INAHFIG R
Sbjct: 153 EATCKVRKANCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRP 212
Query: 167 HNMKRDFTWVQSIAILFDHHQLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKS 226
RD+TWVQ+++++FD H L + A + + W+D+ D L + +D E + + A W++
Sbjct: 213 KGRTRDYTWVQALSVMFDTHTLAIAANRVSHWDDNVDSLIVKWDDELVNIPTDGEAEWRA 272
Query: 227 SG----VSIHRDADTNSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGF 282
+G V + R DTNS+ V V G M V PI E+E+++H Y + +D FAHL+ F
Sbjct: 273 NGDEREVVVERTDDTNSVRVTVSGLIEMDISVKPIREQENKVHNYQLPSDDAFAHLETQF 332
Query: 283 RFFSLSSEVSGVLGQTYKPDYVSRVNVGAKMPVMGGAGKEFQTTSLFTPDCSVARF 338
RF + GVLGQTY+P YVS V G MP+MGG K +QT S+F+ C++ +F
Sbjct: 333 RFKKSTDNFEGVLGQTYRPGYVSPVKRGVPMPMMGGEDK-YQTLSMFSTSCNLCKF 387
>Glyma12g07350.1
Length = 386
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 154/265 (58%), Gaps = 22/265 (8%)
Query: 95 VCPAACPG----------PCEVDCN--TCKPVC-----HCDRPGAVCQDPRFIGGDGITF 137
VCP+ C C +DC+ TC+ C +CD GA+C DPRF+GGDG+ F
Sbjct: 107 VCPSECASRKPKKNKKQKACFIDCSSSTCEATCKVRKANCDGYGALCYDPRFVGGDGVMF 166
Query: 138 YFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFTWVQSIAILFDHHQLFVGAEKTAT 197
YFHG K NF +VSD INAHFIG R RD+TWVQ++A++FD H L + A + +
Sbjct: 167 YFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALAVMFDTHTLVIAANRVSH 226
Query: 198 WEDSNDRLALSFDGEPITLHKSEGAMWKSSG----VSIHRDADTNSIVVEVEGKFRMTSK 253
W+D D L + +D E + + A W+ +G V + R TNS+ V V G M
Sbjct: 227 WDDKVDSLIVKWDDELVNIPTDGEAEWRINGDEREVVVERTDGTNSVRVTVSGLVEMDIS 286
Query: 254 VIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLGQTYKPDYVSRVNVGAKM 313
V PI E+E+++H Y + +D FAHL+ F+F + GVLGQTY+P YVS V G M
Sbjct: 287 VKPIGEQENKVHNYQLPSDDAFAHLETQFKFKKSTDNFEGVLGQTYRPGYVSPVKRGVPM 346
Query: 314 PVMGGAGKEFQTTSLFTPDCSVARF 338
P+MGG K +QT SLF+ C++ +F
Sbjct: 347 PMMGGEDK-YQTLSLFSTSCNLCKF 370
>Glyma12g07360.1
Length = 340
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 32/226 (14%)
Query: 115 CHCDRPGAVCQDPRFIGGDGITFYFHGKKDSNFCLVSDPNLHINAHFIGRRNHNMKRDFT 174
+ D G++C DPRF+GGDG+ FYFHG K NF +VSD + INAHFIG R RD+T
Sbjct: 129 ANSDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDDFQINAHFIGTRPQGGTRDYT 188
Query: 175 WVQSIAILFDHH--QLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKSSGVSIH 232
H + + + + + W+D + +F P+ +EG M
Sbjct: 189 -----------HGCKHLLSSNRVSHWDDKS-----TF---PLMERLNEGLMVMKE----- 224
Query: 233 RDADTNSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVS 292
+ V V G + V PI E+E+++H Y + +D FAHL+ FRF +
Sbjct: 225 -----KCVRVTVSGLVELDIGVKPIGEQENKVHNYQLPSDDAFAHLETQFRFKKSTDNFE 279
Query: 293 GVLGQTYKPDYVSRVNVGAKMPVMGGAGKEFQTTSLFTPDCSVARF 338
GVLGQTY+P YVS V G MP+MG ++QT SLF+ C++ RF
Sbjct: 280 GVLGQTYRPGYVSPVKRGVPMPMMGRE-NQYQTFSLFSTSCNLCRF 324
>Glyma06g38550.1
Length = 198
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 14/203 (6%)
Query: 171 RDFTWVQSIAILFDHHQLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKSSGVS 230
RD+TW+Q++ ILF+ + A KT W ++ D L +++ + ++ S
Sbjct: 6 RDYTWIQALGILFNSKTFSLEALKTPQWSENVDHLKFTYN---------DNLLFSLRVHS 56
Query: 231 IHRDADTNSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSE 290
+H T + + ++ V+P+T+E+ IH Y + +DCFAHL+V FRFF LS
Sbjct: 57 LHLALSTKKCEIGKKDVAKILVNVVPVTKEDDTIHNYQVPNDDCFAHLEVQFRFFGLSPM 116
Query: 291 VSGVLGQTYKPDYVSRVNVGAKMPVMGGAGKEFQTTSLFTPDCS-VARFVGSNNDEV--V 347
V GVLG+TY+ D+ + MPV+G K ++TT+L +P+C+ V S+ +EV V
Sbjct: 117 VDGVLGRTYREDFENPAKASVTMPVVGIEDK-YRTTTLLSPNCAYVFSQQNSHQNEVTKV 175
Query: 348 TLE-MPAMNCVSGIDGQGVVCRR 369
T E M ++C G G+VC++
Sbjct: 176 TAELMRTLDCSKFSYGLGIVCKK 198
>Glyma12g17420.1
Length = 141
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 181 ILFDHHQLFVGAEKTATWEDSNDRLALSFDGEPITLHKSEGAMWKSSG----VSIHRDAD 236
++FD H L + + + +D D L + +D E + + A W+++G V + R +
Sbjct: 1 VMFDTHTLVITGNRLSHRDDKVDCLIVKWDDELVNIPTYGEAKWRANGEERQVVMERTNE 60
Query: 237 TNSIVVEVEGKFRMTSKVIPITEEESRIHRYGITEEDCFAHLDVGFRFFSLSSEVSGVLG 296
TNS+ V + G + + +++H Y + + F+HL+ F GVLG
Sbjct: 61 TNSVTVTISGLVELDIHFFQLDRTCTKVHNYQLPTDYSFSHLETQLWFEKSIDNFEGVLG 120
Query: 297 QTYKPDYVSRVNVGAKMPVM 316
QTY+P YVS V G MP+M
Sbjct: 121 QTYRPGYVSPVKRGVPMPIM 140