Miyakogusa Predicted Gene

Lj6g3v1629470.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1629470.1 Non Chatacterized Hit- tr|B9SB08|B9SB08_RICCO ATP
binding protein, putative OS=Ricinus communis
GN=R,32.26,0.000000000000006,seg,NULL;
coiled-coil,NULL,gene.g66440.t1.1
         (619 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03630.1                                                        82   1e-15
Glyma02g45120.1                                                        54   4e-07

>Glyma14g03630.1 
          Length = 1431

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/105 (54%), Positives = 69/105 (65%), Gaps = 9/105 (8%)

Query: 490 ERKTAVDERKNAAAEARKLLEAPKKIAAEVEKQIAKVE--------LRQVHLEKQVNERK 541
           E+K  VD     AAEA KLLE  KK  A V+ ++A++E         +   LEKQVNE K
Sbjct: 294 EKKRRVDSESKKAAEACKLLEEEKK-KASVKGEMARIEAEKAVKYSFQIGQLEKQVNEAK 352

Query: 542 MKLAFELSKTKEATKRFEAEKKKLLVEKINAESKIKKAQERSESE 586
            KLAFE+S  +EATK+FEAEK+KLL EKINAES + KA ER E E
Sbjct: 353 TKLAFEISTFREATKKFEAEKRKLLAEKINAESGMAKANERLEVE 397


>Glyma02g45120.1 
          Length = 1307

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 55/97 (56%), Gaps = 13/97 (13%)

Query: 490 ERKTAVDERKNAAAEARKLLEAPKKIAAEVEKQIAKVELRQVHLEKQVNERKMKLAFELS 549
           E+K  VD  +  A EA KLLE  K  AA V+ +IA++E  +             L  E+S
Sbjct: 294 EKKRRVDSERKKATEACKLLEEEKNKAA-VKGEIARIEAEKA------------LVSEIS 340

Query: 550 KTKEATKRFEAEKKKLLVEKINAESKIKKAQERSESE 586
             +EATK+FEAE  KLL EK NAES + KA ER E E
Sbjct: 341 TFREATKKFEAENHKLLAEKRNAESGMAKANERLEVE 377