Miyakogusa Predicted Gene

Lj6g3v1618210.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1618210.2 Non Chatacterized Hit- tr|B4FJA0|B4FJA0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,29.52,1e-16,coiled-coil,NULL; seg,NULL,CUFF.59681.2
         (368 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g03330.1                                                       466   e-131
Glyma15g14260.1                                                       463   e-130

>Glyma09g03330.1 
          Length = 383

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/377 (66%), Positives = 287/377 (76%), Gaps = 12/377 (3%)

Query: 1   MRNSKNPDPSS----SSERKNWGNIFNLLVQMVRNQQNQLHSFANQHKLLEDRFKMQHER 56
           MR S+  +PS+    SSE +NW NIF  LVQMV +QQNQLHSFA++HK LEDR +MQHE 
Sbjct: 1   MRTSRKAEPSNNDVVSSEHRNWSNIFKSLVQMVCSQQNQLHSFASRHKFLEDRLRMQHEG 60

Query: 57  WLSDVRLHKDQISQMKGFLMFEEKKGLLEAAKADLTLGFKHREASMLKWILEHTEDELVD 116
           W+SDVR HKDQISQM G L FEEKK  LEAAKAD  L  KHREA+MLKWILEH EDEL D
Sbjct: 61  WVSDVRCHKDQISQMNGMLTFEEKKQSLEAAKADFALSLKHREAAMLKWILEHAEDELAD 120

Query: 117 FKACYDEYLSHISSDEQNQGTVFKDASKRIKETTDSGNXXXXXXXXXXXXXXVIKDELSR 176
           FKA + E LS  SS+ ++QGT FKD   + K +TD GN                KDE SR
Sbjct: 121 FKAWF-EILSCKSSNGEDQGTAFKDTDLKKKGSTDRGNMSTRNTAEKEKYSSENKDEFSR 179

Query: 177 LKGEYEKLALEKNSELSALLAEKKFVWNQYNIMEKDYNDKLRSKQAEVEKANEKIRALVS 236
           LKGEY+KLALEK SE++ LLAEKKF+WNQYN+ME DY DKLR+K+AEVEKANEKI+ LVS
Sbjct: 180 LKGEYDKLALEKYSEVTTLLAEKKFMWNQYNVMENDYADKLRTKEAEVEKANEKIKILVS 239

Query: 237 SMEQLQSENIEKDSAISQLESKVADMEAETKRLNNQISGLSEELGSLRKCRNNQVAP-VL 295
           SMEQLQSEN EKDS IS+L+SK+A+MEAETKRLNN+IS LS EL SLRK RN+QV P VL
Sbjct: 240 SMEQLQSENYEKDSKISELQSKMAEMEAETKRLNNEISELSVELESLRKFRNSQVTPSVL 299

Query: 296 KRCTEGTKTSDSGTIKSSR-RKNVTFNLKKEICTPDADSPAKLSEKD--KKSLKRKGGSV 352
            RCTEGTK  +SG +KS++ R+N+T  LKKEICTPDA  PAK SEK    KS+KRK   V
Sbjct: 300 NRCTEGTKAPESGVVKSNKSRRNMT--LKKEICTPDAPVPAKSSEKGTKTKSMKRKEAPV 357

Query: 353 -PASETPKLFSSSFKVP 368
            P SETPKLFSS FKVP
Sbjct: 358 IPTSETPKLFSSGFKVP 374


>Glyma15g14260.1 
          Length = 383

 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/377 (66%), Positives = 288/377 (76%), Gaps = 12/377 (3%)

Query: 1   MRNSKNPDPSS---SSERKNWGNIFNLLVQMVRNQQNQLHSFANQHKLLEDRFKMQHERW 57
           MRNS+  +PS+   SSER+NW NIF  LVQMVR+QQNQLHSFA++HK LEDR +MQHE W
Sbjct: 1   MRNSRKAEPSNDVVSSERRNWSNIFKSLVQMVRSQQNQLHSFASRHKFLEDRLRMQHEGW 60

Query: 58  LSDVRLHKDQISQMKGFLMFEEKKGLLEAAKADLTLGFKHREASMLKWILEHTEDELVDF 117
           +SDVR HKDQISQM G L  EEKK  LE AKAD  LG KHREA+MLKWILEHTEDEL DF
Sbjct: 61  VSDVRCHKDQISQMNGMLTSEEKKRSLEVAKADFALGLKHREAAMLKWILEHTEDELADF 120

Query: 118 KACYDEYLSHISSDEQNQGTVFKDASKRIKETTDSGNXXXXXXXXXXXXXXV-IKDELSR 176
           KA + E LS  SS+ ++QGT  KD   + K +T+ GN                IKDE SR
Sbjct: 121 KAWF-EILSRKSSNGEDQGTSSKDTDLKKKGSTNRGNKPTRNNTAEKEKYSSEIKDEFSR 179

Query: 177 LKGEYEKLALEKNSELSALLAEKKFVWNQYNIMEKDYNDKLRSKQAEVEKANEKIRALVS 236
           LKGEY+KLALEK SE++ALLAEKKFVWNQYNIME DY DKLR+K+AEVEKANEKI+ LVS
Sbjct: 180 LKGEYDKLALEKYSEVTALLAEKKFVWNQYNIMENDYADKLRTKEAEVEKANEKIKVLVS 239

Query: 237 SMEQLQSENIEKDSAISQLESKVADMEAETKRLNNQISGLSEELGSLRKCRNNQVA-PVL 295
           SMEQLQSE  EKDS IS+L+SK+A+MEAETKRLN +ISGLS EL SLRK RNNQV  PVL
Sbjct: 240 SMEQLQSEKYEKDSKISELQSKMAEMEAETKRLNKEISGLSVELESLRKFRNNQVTPPVL 299

Query: 296 KRCTEGTKTSDSGTIKSSR-RKNVTFNLKKEICTPDADSPAKLSEKD--KKSLKRKGGSV 352
             CT+GTK  +SG +KS+R R+N+T   KKEICTP+A  PAK SE     KS+KRK   V
Sbjct: 300 NHCTQGTKAPESGVVKSNRSRRNMTS--KKEICTPNAPVPAKSSETGTKTKSMKRKEAPV 357

Query: 353 -PASETPKLFSSSFKVP 368
            P S+TPKLFSSSFKVP
Sbjct: 358 IPTSDTPKLFSSSFKVP 374