Miyakogusa Predicted Gene
- Lj6g3v1588720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1588720.1 tr|D8LXP9|D8LXP9_BLAHO Singapore isolate B
(sub-type 7) whole genome shotgun sequence assembly,
scaf,35.32,8e-19,Rib_5-P_isom_A,Ribose 5-phosphate isomerase, type A;
seg,NULL; NagB/RpiA/CoA transferase-like,NULL; ,CUFF.59636.1
(291 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g14460.1 467 e-132
Glyma10g41160.2 113 3e-25
Glyma10g41160.1 112 3e-25
Glyma20g26110.1 110 2e-24
Glyma03g40640.1 107 1e-23
Glyma19g43310.1 107 1e-23
Glyma09g03510.1 87 2e-17
Glyma15g20740.1 59 9e-09
Glyma08g22920.1 55 6e-08
Glyma03g23200.1 54 2e-07
>Glyma15g14460.1
Length = 291
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/280 (86%), Positives = 257/280 (91%)
Query: 12 TRLLLHSPTTLLGXXXXXSNVLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVVGLGSGH 71
TRLLLHS T L+ N LRMVTRSCLDDSSALLRAAQ+TVDTYVKSGMVVGLGSGH
Sbjct: 12 TRLLLHSHTPLVCRRRCRPNFLRMVTRSCLDDSSALLRAAQHTVDTYVKSGMVVGLGSGH 71
Query: 72 ASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDADVI 131
ASGMAIQHLG QLRTGNLKDIVG PMS+SSASEAAKAGIPLDTYQ SSQID AFDDADVI
Sbjct: 72 ASGMAIQHLGSQLRTGNLKDIVGIPMSVSSASEAAKAGIPLDTYQGSSQIDFAFDDADVI 131
Query: 132 EEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVFIIEENQYKRGLEGSIPVLIQSINWM 191
EEGTLV IIGRRKLQG ESIIQEKSI+N++NK VFIIEENQYK GLEGSIPVLIQS+NWM
Sbjct: 132 EEGTLVAIIGRRKLQGGESIIQEKSIINSANKCVFIIEENQYKGGLEGSIPVLIQSLNWM 191
Query: 192 ATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAEVAKS 251
AEEIDDMFLGDAEVWRRPSIGQAGPLGG+FP+VT+EGHN+LDVIFTSPI +LAEVAKS
Sbjct: 192 TIAEEIDDMFLGDAEVWRRPSIGQAGPLGGDFPVVTKEGHNILDVIFTSPIENLAEVAKS 251
Query: 252 LNKVDGVVDHGVISKIPCTVVIASQKELNILDKLTADIVG 291
L+KVDGVVDHGV+SKIPCTVVIASQ LNILDKLTADIVG
Sbjct: 252 LDKVDGVVDHGVVSKIPCTVVIASQTGLNILDKLTADIVG 291
>Glyma10g41160.2
Length = 251
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 47 LLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAA 106
L + A Y YV+SGMV+GLG+G + A+ +G LR G LKDIVG P S + +A
Sbjct: 20 LKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIVGIPTSTKTHEQAL 79
Query: 107 KAGIPLDTYQDSSQIDLAFDDADVIEEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVF 166
GIPL IDLA D AD ++ + ++ R S+++EK + A K +
Sbjct: 80 SLGIPLSDLDAHPAIDLAIDGADEVD--PFLNLVKGRG----GSLLREKMVEGACKKFIV 133
Query: 167 IIEENQYKRGLEGS---IPVLIQSINWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNF 223
I++E++ L GS +PV + W TA + +F V R + G+
Sbjct: 134 IVDESKLVNYLGGSGLAMPVEVIKFCWRFTAARLQKLFEEAGCVARLRTFGEKEK---EE 190
Query: 224 PLVTREGHNVLDVIFTSPIVSLAEVAKSLNKVDGVVDHGVISKIPCTVVIASQKELNILD 283
P VT G+ ++D+ F I L + ++ ++ GVV+HG+ + TV++A + L + +
Sbjct: 191 PYVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKN 250
Query: 284 K 284
K
Sbjct: 251 K 251
>Glyma10g41160.1
Length = 266
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 47 LLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAA 106
L + A Y YV+SGMV+GLG+G + A+ +G LR G LKDIVG P S + +A
Sbjct: 35 LKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIVGIPTSTKTHEQAL 94
Query: 107 KAGIPLDTYQDSSQIDLAFDDADVIEEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVF 166
GIPL IDLA D AD ++ + ++ R S+++EK + A K +
Sbjct: 95 SLGIPLSDLDAHPAIDLAIDGADEVD--PFLNLVKGRG----GSLLREKMVEGACKKFIV 148
Query: 167 IIEENQYKRGLEGS---IPVLIQSINWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNF 223
I++E++ L GS +PV + W TA + +F V R + G+
Sbjct: 149 IVDESKLVNYLGGSGLAMPVEVIKFCWRFTAARLQKLFEEAGCVARLRTFGEKEK---EE 205
Query: 224 PLVTREGHNVLDVIFTSPIVSLAEVAKSLNKVDGVVDHGVISKIPCTVVIASQKELNILD 283
P VT G+ ++D+ F I L + ++ ++ GVV+HG+ + TV++A + L + +
Sbjct: 206 PYVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKN 265
Query: 284 K 284
K
Sbjct: 266 K 266
>Glyma20g26110.1
Length = 303
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 14/241 (5%)
Query: 47 LLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAA 106
L + A Y YV+SGMV+GLG+G + A+ +G LR G LKDIVG P S + +A
Sbjct: 74 LKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIVGIPTSTKTHDQAL 133
Query: 107 KAGIPLDTYQDSSQIDLAFDDADVIEEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVF 166
GIPL +DLA D AD ++ + ++ R S+++EK + A K +
Sbjct: 134 SLGIPLSDLDSHPTVDLAIDGADEVDP--FLNLVKGRG----GSLLREKMVEGACKKFIV 187
Query: 167 IIEENQYKRGLEGS---IPVLIQSINWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNF 223
I++E++ L GS +PV + W TA + +F V + + + +
Sbjct: 188 IVDESKLVNYLGGSGLAMPVEVIQFCWRFTAARLQKLFQEAGCVAKLRTFAEK-----DE 242
Query: 224 PLVTREGHNVLDVIFTSPIVSLAEVAKSLNKVDGVVDHGVISKIPCTVVIASQKELNILD 283
P VT G+ ++D+ F I L + ++ ++ GVV+HG+ + TV++A + L + +
Sbjct: 243 PYVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKN 302
Query: 284 K 284
K
Sbjct: 303 K 303
>Glyma03g40640.1
Length = 281
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 140/269 (52%), Gaps = 20/269 (7%)
Query: 12 TRLLLHSPTTL-LGXXXXXSNVLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVVGLGSG 70
TRL+L +P +L L +R +T + DD L AA V++ VKSGMV+GLG+G
Sbjct: 21 TRLILRTPNSLKLRTPPHSLPAIRAITLTQ-DDLKRL--AADKAVES-VKSGMVLGLGTG 76
Query: 71 HASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDADV 130
+ + LG L +G L DIVG P S + +A GIPL D+ ++DLA D AD
Sbjct: 77 STAAFVVAKLGALLASGQLSDIVGVPTSKRTEEQARSLGIPLSVLDDNPRLDLAIDGADE 136
Query: 131 IEEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVFIIEENQYKRGLEGS---IPVLIQS 187
++ L + GR ++++EK + AS+K V ++++ + GL GS +PV +
Sbjct: 137 VDP-DLNLVKGRGG-----ALLREKMVEAASDKFVVVVDDTKLVDGLGGSGLAMPVEVVQ 190
Query: 188 INWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAE 247
W + + ++F + V + + ++G P VT + ++D+ F +PI
Sbjct: 191 FCWKYNLDRLQELFKEEG-VEAKLRLEESGK-----PYVTDNSNYIVDLYFKTPIRDALA 244
Query: 248 VAKSLNKVDGVVDHGVISKIPCTVVIASQ 276
++ ++GVV+HG+ + +V+IA +
Sbjct: 245 AGAEISALEGVVEHGLFLNMATSVIIAGK 273
>Glyma19g43310.1
Length = 281
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 19/268 (7%)
Query: 12 TRLLLHSPTTLLGXXXXXSNVLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVVGLGSGH 71
TRL+L +P +L S +R +T + DD L AA V++ VKSGMV+GLG+G
Sbjct: 21 TRLILRTPNSLNLRTIPHSLPIRAITLTQ-DDLKRL--AADKAVES-VKSGMVLGLGTGS 76
Query: 72 ASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDADVI 131
+ + LG L +G L DIVG P S + +A GIPL + ++DLA D AD +
Sbjct: 77 TAAFVVAKLGALLASGQLTDIVGVPTSKRTEEQARSLGIPLSVLDHNPRLDLAIDGADEV 136
Query: 132 EEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVFIIEENQYKRGLEGS---IPVLIQSI 188
+ L + GR ++++EK + AS+K V ++++ + GL GS +PV +
Sbjct: 137 DP-DLNLVKGRGG-----ALLREKMVEAASDKFVVVVDDTKLVDGLGGSGLAMPVEVVQF 190
Query: 189 NWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAEV 248
W + + ++F + V + + ++G P V+ + ++D+ F +PI
Sbjct: 191 CWKYNLDRLQELF-KEEGVEAKLRLEESGK-----PYVSDNSNYIVDLYFKTPIRDALAA 244
Query: 249 AKSLNKVDGVVDHGVISKIPCTVVIASQ 276
++ ++GVVDHG+ + +V+IA++
Sbjct: 245 GAEISALEGVVDHGLFLNMATSVIIAAK 272
>Glyma09g03510.1
Length = 129
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 45/52 (86%)
Query: 203 GDAEVWRRPSIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAEVAKSLNK 254
G VWRRPSIGQAGPLGG+FP+VT EGHN+ DVIFTSPI +LAEVAK L+K
Sbjct: 30 GGFLVWRRPSIGQAGPLGGDFPVVTSEGHNIPDVIFTSPIENLAEVAKCLDK 81
>Glyma15g20740.1
Length = 75
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 47 LLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAA 106
L + A Y V YVKSGMV+GLG+G + A+ +G LR G LKDI+G P S + +A
Sbjct: 12 LKKIATYKVVEYVKSGMVLGLGTGSTAKHAVDCIGELLRQGKLKDIIGIPTSTKTHDQAL 71
Query: 107 KAGI 110
GI
Sbjct: 72 SLGI 75
>Glyma08g22920.1
Length = 212
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 12 TRLLLHSPTTLLGXXXXXSNVLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVV--GLGS 69
T L+LH+P +L S +R +T + L R A +VK GMV+ G G+
Sbjct: 21 THLILHTPNSLNLRTMSHSLPIRAITLTW----DYLKRLAANKAVEFVKRGMVLDPGTGT 76
Query: 70 GHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDAD 129
G + I LG L +G L DIVG P S + + GIPL + L DDAD
Sbjct: 77 GSTATFVIAKLGTLLASGQLIDIVGVPTSKRTEDKVLFLGIPLFV------LGLTIDDAD 130
Query: 130 VIEEG-TLVGIIGRRKLQGEESIIQEKSILNASNKLVFIIEENQYKRGLEGS---IPVLI 185
++ L+ G +++ +K + ASNK V ++ + GL GS +PV +
Sbjct: 131 EVDPNLNLIKGCGG-------ALVCKKMVEAASNKFVTDKDDTKLVDGLGGSGLAMPVEL 183
Query: 186 QSI 188
Q +
Sbjct: 184 QEL 186
>Glyma03g23200.1
Length = 82
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 47 LLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAA 106
L + A Y V YVKSGMV GLG+ + A+ ++ LR G LKDI+G P S ++A
Sbjct: 19 LKKIAAYKVVEYVKSGMVFGLGTDSIAKHAVDYISELLRQGKLKDIIGIPTSTKIYNQAL 78
Query: 107 KAGI 110
GI
Sbjct: 79 SLGI 82