Miyakogusa Predicted Gene

Lj6g3v1444590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1444590.1 tr|G7L2J4|G7L2J4_MEDTR 40S ribosomal protein S21
OS=Medicago truncatula GN=MTR_7g076530 PE=3 SV=1,92.59,7e-38,40S
RIBOSOMAL PROTEIN S21,Ribosomal protein S21e;
RS21B_ARATH_Q9M337;,Ribosomal protein S21e; Riboso,CUFF.59500.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15800.1                                                       161   2e-40
Glyma09g05030.2                                                       160   2e-40
Glyma09g05030.1                                                       160   2e-40
Glyma07g37700.1                                                       141   1e-34

>Glyma15g15800.1 
          Length = 82

 Score =  161 bits (407), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 79/81 (97%)

Query: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
          MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGH+DE+GVYNG FST+ALCG+IRA
Sbjct: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGVYNGHFSTFALCGFIRA 60

Query: 61 QGDADSAIDRLWQKKKAEIKQ 81
          QGDADSA+DRLWQKKK E+KQ
Sbjct: 61 QGDADSALDRLWQKKKVEVKQ 81


>Glyma09g05030.2 
          Length = 82

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 79/81 (97%)

Query: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
          MQNEEGQITELYIPRKCSATNRLITAKDHASVQ+NIGH+DE+GVYNG FST+ALCG+IRA
Sbjct: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQVNIGHVDENGVYNGHFSTFALCGFIRA 60

Query: 61 QGDADSAIDRLWQKKKAEIKQ 81
          QGDADSA+DRLWQKKK E+KQ
Sbjct: 61 QGDADSALDRLWQKKKVEVKQ 81


>Glyma09g05030.1 
          Length = 82

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 79/81 (97%)

Query: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGQFSTYALCGYIRA 60
          MQNEEGQITELYIPRKCSATNRLITAKDHASVQ+NIGH+DE+GVYNG FST+ALCG+IRA
Sbjct: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQVNIGHVDENGVYNGHFSTFALCGFIRA 60

Query: 61 QGDADSAIDRLWQKKKAEIKQ 81
          QGDADSA+DRLWQKKK E+KQ
Sbjct: 61 QGDADSALDRLWQKKKVEVKQ 81


>Glyma07g37700.1 
          Length = 89

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/89 (75%), Positives = 77/89 (86%), Gaps = 7/89 (7%)

Query: 1  MQNEEGQITELYIPRKC-------SATNRLITAKDHASVQINIGHLDESGVYNGQFSTYA 53
          MQNEEG++T LY+PRK        SATNRLITAKDHASVQINIGHLDE+G+YNG FST A
Sbjct: 1  MQNEEGKLTGLYVPRKWYYHVRCNSATNRLITAKDHASVQINIGHLDENGIYNGHFSTSA 60

Query: 54 LCGYIRAQGDADSAIDRLWQKKKAEIKQH 82
          L G++RAQGDA+SA+DRLWQKKKAE+KQH
Sbjct: 61 LSGFVRAQGDANSALDRLWQKKKAEVKQH 89