Miyakogusa Predicted Gene

Lj6g3v1442310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1442310.1 tr|A9T655|A9T655_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140834,42.98,2e-17, ,CUFF.59489.1
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16380.1                                                       313   8e-86
Glyma09g05120.1                                                       313   1e-85
Glyma15g16380.2                                                       159   2e-39

>Glyma15g16380.1 
          Length = 195

 Score =  313 bits (802), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 154/195 (78%), Positives = 168/195 (86%)

Query: 1   MGQAFRRASGRIRAASEADTSSLSRPKPAVDHRPPTKVAADKSAEISKAAQQDVLEADDR 60
           MGQAFRRASGRIRAASEADTSS S+ K AVD +PP   AADK+A+I KAA+QDVL  DDR
Sbjct: 1   MGQAFRRASGRIRAASEADTSSFSKSKTAVDRQPPPNAAADKAAQIPKAAEQDVLHTDDR 60

Query: 61  PRVNVDNILEERDPSYDAMLGQMVGRIKSKPGGKSEMGEAFLVEKYRRPMPRLRNTKPDS 120
           PRVN DNILEERDP +DAMLGQMVGRI SKPGGK EMGEAF+VEK+ RPMP+LRNTKPD 
Sbjct: 61  PRVNTDNILEERDPKFDAMLGQMVGRITSKPGGKPEMGEAFVVEKFNRPMPKLRNTKPDF 120

Query: 121 GGYEERPVPTGTLNVAQLRQIILLHNGKAEDHNGPMDAHQIAEKFQVDVVQIQRILQFLS 180
           G  EERPVP GTLNVAQLR IILLH GKA+D+NG MDAHQIAEKF+V+VVQIQ ILQFLS
Sbjct: 121 GRNEERPVPAGTLNVAQLRHIILLHEGKADDYNGRMDAHQIAEKFRVNVVQIQTILQFLS 180

Query: 181 EPPEGSKEDKNKTPR 195
            PPE S +DKNK PR
Sbjct: 181 LPPENSSKDKNKAPR 195


>Glyma09g05120.1 
          Length = 191

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/195 (78%), Positives = 170/195 (87%), Gaps = 4/195 (2%)

Query: 1   MGQAFRRASGRIRAASEADTSSLSRPKPAVDHRPPTKVAADKSAEISKAAQQDVLEADDR 60
           MGQAFRRASGRIRAASEADTSS S+PK AVD RPP   AADK+A+I KAA+ DVL A+D 
Sbjct: 1   MGQAFRRASGRIRAASEADTSSFSKPKNAVDRRPPPNAAADKAAQIPKAAEHDVLHANDS 60

Query: 61  PRVNVDNILEERDPSYDAMLGQMVGRIKSKPGGKSEMGEAFLVEKYRRPMPRLRNTKPDS 120
           PRVN DNILEERDP +DAMLGQM+GRI SKP    EMGEAF+V+KY RPMP+LRNTKPDS
Sbjct: 61  PRVNTDNILEERDPKFDAMLGQMIGRITSKP----EMGEAFVVDKYNRPMPKLRNTKPDS 116

Query: 121 GGYEERPVPTGTLNVAQLRQIILLHNGKAEDHNGPMDAHQIAEKFQVDVVQIQRILQFLS 180
           G Y+ERPVP GTLNVAQLR +ILLH GKA+D+NG MDAHQIAEKF+VDVVQIQRILQFLS
Sbjct: 117 GRYDERPVPAGTLNVAQLRHVILLHEGKADDYNGRMDAHQIAEKFRVDVVQIQRILQFLS 176

Query: 181 EPPEGSKEDKNKTPR 195
           +PPEGS +DKNK PR
Sbjct: 177 QPPEGSSKDKNKAPR 191


>Glyma15g16380.2 
          Length = 109

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/99 (79%), Positives = 85/99 (85%)

Query: 1  MGQAFRRASGRIRAASEADTSSLSRPKPAVDHRPPTKVAADKSAEISKAAQQDVLEADDR 60
          MGQAFRRASGRIRAASEADTSS S+ K AVD +PP   AADK+A+I KAA+QDVL  DDR
Sbjct: 1  MGQAFRRASGRIRAASEADTSSFSKSKTAVDRQPPPNAAADKAAQIPKAAEQDVLHTDDR 60

Query: 61 PRVNVDNILEERDPSYDAMLGQMVGRIKSKPGGKSEMGE 99
          PRVN DNILEERDP +DAMLGQMVGRI SKPGGK EMGE
Sbjct: 61 PRVNTDNILEERDPKFDAMLGQMVGRITSKPGGKPEMGE 99