Miyakogusa Predicted Gene

Lj6g3v1415950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1415950.1 tr|Q8H3W6|Q8H3W6_ORYSJ WD-40 repeat protein-like
OS=Oryza sativa subsp. japonica GN=P0585H11.112
PE=,37.34,7e-19,seg,NULL,CUFF.59463.1
         (225 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16730.1                                                       237   9e-63
Glyma09g05370.1                                                        69   3e-12

>Glyma15g16730.1 
          Length = 478

 Score =  237 bits (604), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 129/229 (56%), Positives = 151/229 (65%), Gaps = 11/229 (4%)

Query: 1   MPPPPELPGFYYDPEKNRYFXXXXXXXXXXXXXXXXXXXXDLNXXXXXXXXXXXXXXXXY 60
           MP P ELPGFYYDPEKNRYF                     LN                 
Sbjct: 1   MPQPKELPGFYYDPEKNRYFPIKGPIPGSSSKPKTPA----LNSPQTSSNQESGGSC--- 53

Query: 61  CWKVRNRTTSNLLQGRELGGHHVSAS-HC---FSEEFRKMQASQPAVWKYQGTDKIGISA 116
           C K+RNRT S LLQ REL GH V  S +C   F+EEFRKMQAS+P VWKY+GTD + I+A
Sbjct: 54  CRKLRNRTLSKLLQARELDGHSVVISRYCRSNFTEEFRKMQASRPVVWKYRGTDGMRITA 113

Query: 117 LEHMKVDVKTAEGRVETDVLLTGSINGTLSFCEVGRVGQNFDSGVTWMPDHVKNYVGGKT 176
           LEH++VDV+T+EG+ ETDVLLTGS NG++SF +VG VG+N+D G  W  D VKNYV G+T
Sbjct: 114 LEHLRVDVQTSEGQTETDVLLTGSTNGSMSFSQVGGVGRNYDGGTKWRADCVKNYVKGRT 173

Query: 177 DERYEVPGPVSRPNGASLIMSSRVSCIRLGSKCSSTAVNDDPIVGHALF 225
           DE  EV  PV +PN A+L+MSSR+S IRLG KCSS AVND  IVG ALF
Sbjct: 174 DEHNEVLKPVFKPNRAALLMSSRISSIRLGPKCSSHAVNDGHIVGRALF 222


>Glyma09g05370.1 
          Length = 64

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 41/57 (71%)

Query: 145 LSFCEVGRVGQNFDSGVTWMPDHVKNYVGGKTDERYEVPGPVSRPNGASLIMSSRVS 201
           +SF +VG VG+N D G  W  D VKNYV G+TDE  EV  PV +PN A+L+MSSR+S
Sbjct: 1   MSFSQVGGVGRNHDGGTKWRADCVKNYVKGRTDENNEVLKPVFKPNRAALLMSSRIS 57