Miyakogusa Predicted Gene

Lj6g3v1414820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1414820.1 tr|Q653D6|Q653D6_ORYSJ Molybdenum cofactor
sulfurase protein-like OS=Oryza sativa subsp. japonica
GN,61.04,2e-18,MOSC_N,MOSC, N-terminal beta barrel; MOLYBDOPTERIN
COFACTOR SULFURASE (MOSC),NULL; MOSC N-terminal d,CUFF.59484.1
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g05530.1                                                       125   1e-29
Glyma09g05520.1                                                       123   5e-29
Glyma09g00460.2                                                        50   7e-07
Glyma09g00460.1                                                        50   7e-07

>Glyma09g05530.1 
          Length = 339

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 4/102 (3%)

Query: 21  ATTTEIPGGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNEPK 80
           ++T   P  KVS IF+YPIKSCR ISVS AP TP GFRWDR+WMVVNS+G+  +QR EP+
Sbjct: 28  SSTPATPSAKVSAIFIYPIKSCRAISVSRAPLTPTGFRWDRQWMVVNSQGRMYTQRVEPR 87

Query: 81  LALVHVDLPNEAFAEDWQAPEDSFMGI----LHLLRVLLCKQ 118
           LALV V+LP+EAF E+W+  +DS+M +    +  L++ L +Q
Sbjct: 88  LALVEVELPSEAFLENWEPTQDSYMVVNAPGMQPLKICLSQQ 129


>Glyma09g05520.1 
          Length = 315

 Score =  123 bits (309), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 4/105 (3%)

Query: 26  IPGGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNEPKLALVH 85
           IP  KVS +F+YPIKSCRGISVS AP TPAG RWDREW+VVNS+G+A +QR +PKLALV 
Sbjct: 10  IPAVKVSRLFIYPIKSCRGISVSYAPLTPAGLRWDREWVVVNSQGRACTQRVDPKLALVE 69

Query: 86  VDLPNEAFAEDWQAPEDSFMGILHLLRVLLCKQFSACLKTCSETT 130
           V+LPN+A  ED++   DS+M    +L+    K  + CL    E T
Sbjct: 70  VELPNDALVEDFEPTSDSYM----VLKAPGMKPLNICLSKQHEVT 110


>Glyma09g00460.2 
          Length = 815

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 28  GGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNEPKLALV 84
           G  +  I +YPIKSC G S SS P +  G   DREW++ +  G+ ++Q+  P++  +
Sbjct: 522 GYYLKSITIYPIKSCGGFSASSWPLSNNGLTHDREWILKSLTGEILTQKKVPEMGFI 578


>Glyma09g00460.1 
          Length = 816

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 28  GGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNEPKLALV 84
           G  +  I +YPIKSC G S SS P +  G   DREW++ +  G+ ++Q+  P++  +
Sbjct: 522 GYYLKSITIYPIKSCGGFSASSWPLSNNGLTHDREWILKSLTGEILTQKKVPEMGFI 578