Miyakogusa Predicted Gene

Lj6g3v1412710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1412710.1 tr|B2KZH0|B2KZH0_PICAB Quartet 3 (Fragment)
OS=Picea abies GN=QRT3 PE=2
SV=1,64.44,0.000000002,seg,NULL,gene.g66187.t1.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16930.1                                                       292   2e-79
Glyma08g09340.1                                                       272   2e-73
Glyma05g26430.1                                                       270   7e-73
Glyma09g05610.1                                                       187   8e-48
Glyma19g04020.1                                                       186   1e-47
Glyma13g06470.1                                                       186   1e-47
Glyma15g16880.1                                                       120   7e-28
Glyma11g21220.1                                                        97   1e-20

>Glyma15g16930.1 
          Length = 475

 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/193 (75%), Positives = 158/193 (81%), Gaps = 2/193 (1%)

Query: 1   MITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGA 60
           M+TGVHCYNKAT FGGIGILVKLAG SQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLG A
Sbjct: 284 MLTGVHCYNKATGFGGIGILVKLAGNSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGDA 343

Query: 61  NIVLKSIKGKVSGLNIVDNMFSGKW-NQVPIVALDGQFSSIDQVVIDRNNVYGSMSLRST 119
           NIVLKSIKG+VSGLNIV+NMF+G   N+VPIV LDGQFS+IDQV IDRNNV G MSLRST
Sbjct: 344 NIVLKSIKGQVSGLNIVNNMFTGNPNNKVPIVTLDGQFSNIDQVAIDRNNVIG-MSLRST 402

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQGEPKFLAHXXXXXXXXXXXXXXX 179
           V KLTV GNG++WVADFSNVL+FPNRIS+FQYSFY+QGEPKFLAH               
Sbjct: 403 VGKLTVTGNGTQWVADFSNVLLFPNRISNFQYSFYAQGEPKFLAHSVTNVTNNVIVVESE 462

Query: 180 XXXXXXXXFFIEQ 192
                   FF+EQ
Sbjct: 463 KSAQGVVSFFVEQ 475


>Glyma08g09340.1 
          Length = 462

 Score =  272 bits (695), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 135/164 (82%), Positives = 147/164 (89%), Gaps = 2/164 (1%)

Query: 1   MITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGA 60
           ++TGVHCYNKAT FGGIGILVKLAG S TRIDNCY+DYTGIVMEDPVQVHVTNG FLG A
Sbjct: 271 ILTGVHCYNKATYFGGIGILVKLAGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDA 330

Query: 61  NIVLKSIKGKVSGLNIVDNMFSGKWN-QVPIVALDGQFSSIDQVVIDRNNVYGSMSLRST 119
           NIVLKSIKG++ GLNIVDNMF+G  N +VPIV LDG FSSIDQVVID NNV G MSLRST
Sbjct: 331 NIVLKSIKGQILGLNIVDNMFNGDPNKKVPIVNLDGAFSSIDQVVIDHNNVNG-MSLRST 389

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQGEPKFLA 163
           V KLT +GNG+KWVADFS+VLVFPNRISHFQYSFY+Q EPKF+A
Sbjct: 390 VGKLTASGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVA 433


>Glyma05g26430.1 
          Length = 416

 Score =  270 bits (690), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 134/164 (81%), Positives = 148/164 (90%), Gaps = 2/164 (1%)

Query: 1   MITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGA 60
           ++TGVHCYNKAT FGGIGILVKLAG S TRIDNCY+DYTGIVMEDPVQVHVTNG FLG A
Sbjct: 233 ILTGVHCYNKATYFGGIGILVKLAGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDA 292

Query: 61  NIVLKSIKGKVSGLNIVDNMFSGKWN-QVPIVALDGQFSSIDQVVIDRNNVYGSMSLRST 119
           NIVLKSIKG++ GLNIVDNMF+G  N +VPIV LDG+FSSI+QVVIDRNNV G MSLRST
Sbjct: 293 NIVLKSIKGQIFGLNIVDNMFNGDPNKKVPIVKLDGEFSSIEQVVIDRNNVNG-MSLRST 351

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQGEPKFLA 163
           V KLT +GNG+KWVADFS+VLVFPNRISHFQYSFY+Q E KF+A
Sbjct: 352 VGKLTASGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEAKFVA 395


>Glyma09g05610.1 
          Length = 498

 Score =  187 bits (474), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/158 (59%), Positives = 116/158 (73%), Gaps = 4/158 (2%)

Query: 3   TGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANI 62
           +GVHCYNKAT FGG GI +KL G +QTRI N YMDYT IV EDPVQ+H+++ FFLG ANI
Sbjct: 304 SGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANI 363

Query: 63  VLKSIKGKVSGLNIVDNMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRST 119
           VLKS  G V+G++IVDNMFSG    V IV LD     F  IDQV++DRN   G M L++T
Sbjct: 364 VLKSKNGIVNGVDIVDNMFSGSNQGVEIVQLDQSNSPFQQIDQVIVDRNIARG-MKLKAT 422

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQG 157
           V+K+++ GNG+ W  DF+NVL+FPN I + QYS  S G
Sbjct: 423 VAKMSMQGNGTSWSVDFNNVLLFPNLIKNVQYSLSSSG 460


>Glyma19g04020.1 
          Length = 370

 Score =  186 bits (472), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 94/159 (59%), Positives = 117/159 (73%), Gaps = 4/159 (2%)

Query: 2   ITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGAN 61
           ++GVHCYNKAT FGG GI +KL G +QTRI NCYMDYT IV EDPVQ+H+++ FFLG A 
Sbjct: 175 LSGVHCYNKATGFGGKGIYLKLPGLTQTRIVNCYMDYTNIVAEDPVQLHISSSFFLGDAG 234

Query: 62  IVLKSIKGKVSGLNIVDNMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRS 118
           IVLKS+ G VSGLNIVDNMFSG    V IV LD     F+ IDQV + RN V G M+L++
Sbjct: 235 IVLKSVNGIVSGLNIVDNMFSGLNKGVDIVKLDQSNSPFNQIDQVFVARNVVRG-MNLKA 293

Query: 119 TVSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQG 157
           T +K+++ GNG+ W +DF+ VL+FPN I H  YS  + G
Sbjct: 294 TTAKMSLLGNGTTWTSDFTKVLLFPNLIKHVVYSLSANG 332


>Glyma13g06470.1 
          Length = 489

 Score =  186 bits (472), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 94/159 (59%), Positives = 117/159 (73%), Gaps = 4/159 (2%)

Query: 2   ITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGAN 61
           ++GVHCYNKA+ FGG GI +KL G +QTRI N YMDYT IV EDPVQ+H+++ FFLG A 
Sbjct: 294 LSGVHCYNKASGFGGTGIYLKLPGLTQTRIVNSYMDYTNIVAEDPVQLHISSSFFLGDAG 353

Query: 62  IVLKSIKGKVSGLNIVDNMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRS 118
           IVLKS+KG VSGLNIVDNMFSG    V IV LD     F+ IDQV + RN V G M+L++
Sbjct: 354 IVLKSVKGVVSGLNIVDNMFSGLNKGVDIVKLDQSNSHFNQIDQVFVARNVVRG-MNLKA 412

Query: 119 TVSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQG 157
           T +K+++ GNG+ W ADF+ VL+FPN I H  YS  + G
Sbjct: 413 TAAKMSLLGNGTSWTADFNKVLLFPNLIKHVVYSLSASG 451


>Glyma15g16880.1 
          Length = 395

 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 37/156 (23%)

Query: 2   ITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGAN 61
           I+ VHCYNKA+ FGG GI +KL  +S             IV EDPVQ+H+++ FFLG AN
Sbjct: 249 ISAVHCYNKASGFGGTGIYLKLPSFS-------------IVAEDPVQLHISSSFFLGDAN 295

Query: 62  IVLKSIKGKVSGLNIVDNMFSGKWNQVPIVALDGQFSSIDQVVIDRNNVYGSMSLRSTVS 121
           I  KS  G V+G++IVD                       QV++D+N   G M L +TV+
Sbjct: 296 IAPKSKNGVVNGVDIVD-----------------------QVIVDKNIARG-MKLTATVA 331

Query: 122 KLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQG 157
           K+++ GNG+ W  DF+NVL+FPN I + QYS  S+G
Sbjct: 332 KMSMQGNGTSWSVDFNNVLLFPNLIKNVQYSLSSKG 367


>Glyma11g21220.1 
          Length = 274

 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 4/109 (3%)

Query: 52  TNGFFLGGANIVLKSIKGKVSGLNIVDNMFSGKWNQVPIVALDGQ---FSSIDQVVIDRN 108
           ++  FL  A+IVLKS+K  VSGLNIVDNMFSG    V IV LD     F+ IDQV + RN
Sbjct: 129 SSSLFLDDASIVLKSVKRIVSGLNIVDNMFSGLNKGVDIVKLDQSNSLFNQIDQVFVARN 188

Query: 109 NVYGSMSLRSTVSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQG 157
            V G M+++ T +K+++ GN + W ADFS VL+FPN + H  YS  + G
Sbjct: 189 VVRG-MNIKVTNAKMSLLGNETSWTADFSKVLLFPNLVKHVVYSLSANG 236