Miyakogusa Predicted Gene

Lj6g3v1358590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1358590.1 Non Chatacterized Hit- tr|D7L1Z2|D7L1Z2_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.12,3e-18,seg,NULL,CUFF.59390.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g17550.1                                                       201   3e-52
Glyma09g06290.1                                                       188   2e-48
Glyma17g06920.1                                                       178   3e-45
Glyma13g00830.1                                                       110   1e-24

>Glyma15g17550.1 
          Length = 203

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/208 (54%), Positives = 136/208 (65%), Gaps = 36/208 (17%)

Query: 1   MEGQPAKRRRVYSVEPNKVVEAAFARNYMNYLVPALMKIKEINT--------CGGDIQNV 52
           MEGQPAKRRRVYS+EPNKV +AAFARNYMNYLVPALMKIKE +T        C  +IQNV
Sbjct: 1   MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERSTSSDQHSGYCDDNIQNV 60

Query: 53  VKHEVDMAMVSSAQGFAWSNSLKLKLQNQREDIGVSVN----GNTS-------------- 94
           VK+EVDMAMV SAQGFAWSN+L +KLQ  R ++         G++S              
Sbjct: 61  VKYEVDMAMVHSAQGFAWSNALSVKLQRDRVNVDCDTTSFGEGSSSSRVCGQNCEMVPLD 120

Query: 95  -IPQSPSSESQAKILVSKSKNNDMPTMKRDLXXXXXXXXXX--NGQLKSLKRLIPGGENM 151
             P +PS       L S +K  +MP MKR L            NGQLKSL+RL+PGGE M
Sbjct: 121 NFPSNPS-------LKSNNKCKEMPEMKRGLREDDDGDEDEVINGQLKSLRRLMPGGEEM 173

Query: 152 CNDEMVVELESYIGCLQMQVNILQYLAD 179
           C+++MV EL+SY+ CLQMQVNIL+ LA+
Sbjct: 174 CSEQMVTELQSYVSCLQMQVNILRCLAE 201


>Glyma09g06290.1 
          Length = 207

 Score =  188 bits (478), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/207 (53%), Positives = 132/207 (63%), Gaps = 30/207 (14%)

Query: 1   MEGQPAKRRRVYSVEPNKVVEAAFARNYMNYLVPALMKIKE----------INTCGGD-I 49
           MEGQPAKRRRVYS+EP KV +AAFARNYMN LVPALMKIKE          +++C  D I
Sbjct: 1   MEGQPAKRRRVYSLEPTKVEQAAFARNYMNCLVPALMKIKERSSTSAEQHSVHSCDDDNI 60

Query: 50  QNVVKHEVDMAMVSSAQGFAWSNSLKLKLQNQREDIGVSVNGNTSIPQSP---------- 99
           QNVVK+EVDMAMV SAQG+AWSN+L +KLQ  R  + V  +  +    SP          
Sbjct: 61  QNVVKYEVDMAMVRSAQGYAWSNALSVKLQRNR--VNVDCDTTSFGEGSPSRVCGQNYEM 118

Query: 100 ---SSESQAKILVSKSKNNDMPTMKRDLXXXXXXXXXX----NGQLKSLKRLIPGGENMC 152
              S+ S    L S +K  +M  MKR L               GQLKSL+RLIPGGE MC
Sbjct: 119 VPLSNFSSNPSLKSNNKCKEMSEMKRGLREDDDGGGDEDEVIKGQLKSLRRLIPGGEEMC 178

Query: 153 NDEMVVELESYIGCLQMQVNILQYLAD 179
           +++MV EL+SY+ CLQMQVNILQ LA+
Sbjct: 179 SEQMVTELQSYVSCLQMQVNILQCLAE 205


>Glyma17g06920.1 
          Length = 209

 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/206 (50%), Positives = 132/206 (64%), Gaps = 30/206 (14%)

Query: 1   MEGQPAKRRRVYSVEPNKVVEAAFARNYMNYLVPALMKIKEINTC------GGDIQNVVK 54
           MEGQ AKRRRVYSVEPN++V++ F RNY+N+LVPAL+KIKE ++         DI N VK
Sbjct: 1   MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKIKEKSSVEEDRRHCDDINNAVK 60

Query: 55  HEVDMAMVSSAQGFAWSNSLKLKLQNQREDIGVSVNGNTSIPQ---------SPSSESQA 105
           +EVDMAMV SAQGFAWSN LK KLQ+  +D+ V+   +TS  +         S ++  + 
Sbjct: 61  YEVDMAMVLSAQGFAWSNGLKDKLQS--DDVHVNAAKSTSFLENDEAGEGSSSKNAYDKN 118

Query: 106 KILV----------SKSKNNDMPTMKRDLXXXXXXXXXX--NGQLKSLKRLIPGGENMCN 153
           ++++          SKSK  DM  MKRDL            + Q K L+RLIPGGE MC+
Sbjct: 119 EVVLPMEYFSSNPSSKSKCKDMSEMKRDLAREDDDKEDEDISNQWKKLRRLIPGGEEMCD 178

Query: 154 DE-MVVELESYIGCLQMQVNILQYLA 178
           DE MV ELESYI CLQMQVN LQ+L 
Sbjct: 179 DEQMVSELESYISCLQMQVNALQFLC 204


>Glyma13g00830.1 
          Length = 141

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 83/142 (58%), Gaps = 21/142 (14%)

Query: 59  MAMVSSAQGFAWSNSLKLKLQNQREDIGVSVNGNTSIPQSPSSESQAKILV--------- 109
           MAMV SAQGFAWSN LK+KLQ+  +D+ V+   +T   ++ +SE  +K  V         
Sbjct: 1   MAMVLSAQGFAWSNGLKVKLQS--DDVHVNAAKSTRFLENEASEGSSKNNVYDKNEVVPM 58

Query: 110 --------SKSKNNDMPTMKRDLXXXXXXXXXX-NGQLKSLKRLIPGGENMCNDE-MVVE 159
                   S+SK  DM  MKRDL           N Q K L+R+IPGGE MC+DE MV E
Sbjct: 59  EYFSSNPSSRSKCKDMSEMKRDLAREDDKEAEDINNQWKRLRRMIPGGEEMCDDEQMVSE 118

Query: 160 LESYIGCLQMQVNILQYLADQT 181
           LESYI CLQMQVN LQ+L   T
Sbjct: 119 LESYINCLQMQVNALQFLLPHT 140