Miyakogusa Predicted Gene

Lj6g3v1334380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1334380.1 tr|Q5Z846|Q5Z846_ORYSJ Os06g0700300 protein
OS=Oryza sativa subsp. japonica GN=P0468G03.21 PE=2
SV=1,42.86,0.000000000000006,DUF4228,Protein of unknown function
DUF4228; seg,NULL,CUFF.59373.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g00600.1                                                       204   4e-53
Glyma17g06780.1                                                       204   4e-53
Glyma09g06610.1                                                       177   8e-45
Glyma15g17790.1                                                       145   2e-35
Glyma18g06420.1                                                        50   2e-06
Glyma11g06590.1                                                        50   2e-06

>Glyma13g00600.1 
          Length = 171

 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 110/192 (57%), Positives = 128/192 (66%), Gaps = 25/192 (13%)

Query: 1   MGGCFSCRXXXXXXXXXXVRLVHLSGYVEDFEQPISVSQVTGNSGNPTSHFVCTSVQLLS 60
           MG CFSC           +R+VHL+GYVEDF+QPISV QV G    P  HFVCTS QLLS
Sbjct: 1   MGACFSCNSSSTLKN---IRVVHLNGYVEDFDQPISVRQVIGY---PQKHFVCTSTQLLS 54

Query: 61  SCSKSLKGDTQLQPGNVYFMLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDKKSL 120
            CS S+ GDT LQPG VYFMLPYS+L  DVSPVDLA LAKRLT+IA              
Sbjct: 55  PCSTSMNGDTHLQPGQVYFMLPYSVLHADVSPVDLAGLAKRLTAIA-------------- 100

Query: 121 KASPLASQIGLSNVWSSPSRSPGRVGVAEEIGLAY---GGRSVSGVRPWKPILGTIREKS 177
           K+ PL+SQ      W+SPSRSPGRVGVAE+ G+     GG+S S V+PWKPIL TI EK 
Sbjct: 101 KSGPLSSQT--QTFWNSPSRSPGRVGVAEQYGVGMMNIGGKSPSKVQPWKPILDTITEKP 158

Query: 178 LNRRSESDLLEN 189
            ++R+E DL E+
Sbjct: 159 FHKRTEPDLQES 170


>Glyma17g06780.1 
          Length = 170

 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/192 (58%), Positives = 129/192 (67%), Gaps = 25/192 (13%)

Query: 1   MGGCFSCRXXXXXXXXXXVRLVHLSGYVEDFEQPISVSQVTGNSGNPTSHFVCTSVQLLS 60
           MG CFSC           +R+VHL+GYVEDF+QPISV QV G    P  HFVCTS QLLS
Sbjct: 1   MGACFSCNSSSTLKN---IRVVHLNGYVEDFDQPISVRQVIGY---PKKHFVCTSTQLLS 54

Query: 61  SCSKSLKGDTQLQPGNVYFMLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDKKSL 120
            CS S+ GDT LQPG VYFMLPYS+LQ DVSPV+LA LAKRLT+IA              
Sbjct: 55  PCSTSMNGDTNLQPGQVYFMLPYSVLQADVSPVELAGLAKRLTTIA-------------- 100

Query: 121 KASPLASQIGLSNVWSSPSRSPGRVGVAEEIGLAY---GGRSVSGVRPWKPILGTIREKS 177
           K+ PL+SQ      W+SPSRSPG VGVAE+ G+     GGRS S V+PWKPIL TI EK 
Sbjct: 101 KSGPLSSQT--QTFWNSPSRSPGGVGVAEKYGVGLMNIGGRSPSKVQPWKPILDTITEKP 158

Query: 178 LNRRSESDLLEN 189
            ++RSESDL E+
Sbjct: 159 FHKRSESDLQES 170


>Glyma09g06610.1 
          Length = 130

 Score =  177 bits (448), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 100/133 (75%), Positives = 105/133 (78%), Gaps = 5/133 (3%)

Query: 58  LLSSCSKSLKGDTQLQPGNVYFMLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDK 117
           LLSSCSK L GDTQLQPGNVYFMLPYSILQ DVSPVDLASLAKRLT+IAKTR R   E K
Sbjct: 1   LLSSCSKPLNGDTQLQPGNVYFMLPYSILQADVSPVDLASLAKRLTAIAKTRSRKL-EGK 59

Query: 118 KSLKASPLASQIGLSNVWSSPSRSPGRV-GVAEEIGLAYGGRSVSGVRPWKPILGTIREK 176
           KS   S L      SNVWSSPSRSPGR+ GV E+IG+ YGG S   VRPWKPIL TIREK
Sbjct: 60  KS---SSLKDGSFSSNVWSSPSRSPGRLGGVVEQIGMPYGGPSPCRVRPWKPILDTIREK 116

Query: 177 SLNRRSESDLLEN 189
           S NRRSESDL E+
Sbjct: 117 SFNRRSESDLQEH 129


>Glyma15g17790.1 
          Length = 105

 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/110 (72%), Positives = 86/110 (78%), Gaps = 6/110 (5%)

Query: 80  MLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDKKSLKASPLASQIGLSNVWSSPS 139
           MLPYSILQ DVSPVDLASLAKRLT+IAKT RR  D  K SLK    +S     NVWSSPS
Sbjct: 1   MLPYSILQTDVSPVDLASLAKRLTAIAKTSRR-LDGKKSSLKDGSFSS-----NVWSSPS 54

Query: 140 RSPGRVGVAEEIGLAYGGRSVSGVRPWKPILGTIREKSLNRRSESDLLEN 189
           RSPGR+GV E+IG+ YGGRS   VRPWKPIL TIREKS NRRSESDL E+
Sbjct: 55  RSPGRLGVVEQIGMPYGGRSPCRVRPWKPILDTIREKSFNRRSESDLQEH 104


>Glyma18g06420.1 
          Length = 165

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 19/141 (13%)

Query: 19  VRLVHLSGYVEDFEQPISVSQVTGNSGN-----PTSHFVCTSVQLLSSCSKSLKGDTQLQ 73
           +R+VHL+GYVE+  +PI+  +V   + N     P+S  V   + +LS        +T+L+
Sbjct: 21  IRIVHLNGYVEEITRPITAGEVLKANPNHVLSKPSSQGVVRRILILSP-------ETELK 73

Query: 74  PGNVYFMLPYSILQPDVSPVDLASLA-----KRLTSIAKTRRRSCDEDKKSLKASPL-AS 127
            G++YF++P S L  +       S+      K+  S  K+ + S D D  SL    L  +
Sbjct: 74  RGSIYFLIPESSLPENKRHAGKGSIGGDSGIKKKASTMKSNKGSSDVDYSSLPQGYLKVT 133

Query: 128 QIGLSNVWSS-PSRSPGRVGV 147
             G     SS   R  GR+G+
Sbjct: 134 HKGSKEKRSSCRDRRKGRIGI 154


>Glyma11g06590.1 
          Length = 163

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 20/146 (13%)

Query: 1   MGGCFSCRXXXXXXXXXXVRLVHLSGYVEDFEQPISVSQVTGNSGNPTSHFVCTSVQL-L 59
           MG C S             +L+   G +++F  P+ VS +  N     + F+C S ++  
Sbjct: 1   MGNCSS----SDSTQLATAKLLLQDGRLQEFSYPVKVSFLLHNY---PACFICNSDEMEF 53

Query: 60  SSCSKSLKGDTQLQPGNVYFMLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDKKS 119
                 +  D  LQPG +YF LP S+L+  + P ++A+LA + +S        C   +K 
Sbjct: 54  HDVVSPIHEDQVLQPGQLYFALPLSLLRHSLQPHEMAALAVKASSALMKTAHKCGSRRK- 112

Query: 120 LKASPLASQIGLSNVWSSPSRSPGRV 145
                   QI  SN + S   +P RV
Sbjct: 113 --------QILFSNEYDS---NPKRV 127