Miyakogusa Predicted Gene
- Lj6g3v1333090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1333090.1 tr|Q6EUQ6|Q6EUQ6_ORYSJ Os02g0175700 protein
OS=Oryza sativa subsp. japonica GN=OJ1077_E05.14 PE=2
SV,58.51,2e-18,CLATHRIN ASSEMBLY PROTEIN,NULL,CUFF.59353.1
(116 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g06700.1 177 2e-45
Glyma09g06710.1 174 2e-44
Glyma15g17910.1 171 1e-43
Glyma13g00550.1 150 3e-37
Glyma08g10050.1 76 8e-15
Glyma17g11910.2 73 6e-14
Glyma17g11910.1 73 6e-14
Glyma05g27070.1 73 7e-14
Glyma13g22970.1 72 2e-13
Glyma09g21570.1 66 7e-12
Glyma10g12430.1 59 1e-09
Glyma13g22680.1 52 2e-07
Glyma15g05660.1 51 3e-07
Glyma05g24940.1 50 5e-07
Glyma08g19330.1 49 1e-06
Glyma04g07050.1 47 6e-06
>Glyma17g06700.1
Length = 562
Score = 177 bits (450), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 96/109 (88%), Gaps = 1/109 (0%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
+ALAI+PP GH NNLAL++I GT+GWELALVT PSNHT+QAPDR+MAGGFDKLLLDSLY
Sbjct: 397 LALAIVPPGGHYSNNLALTNISGTSGWELALVTTPSNHTSQAPDRRMAGGFDKLLLDSLY 456
Query: 61 EDDNARRQHQLQMAGYGHGGVPVENPFDHYNQQHDPFAMSSNIAPPTNV 109
ED+NARRQ QL+ AGYG+ G+ NPFDHYNQQ DPFAMS+NIAPP NV
Sbjct: 457 EDENARRQLQLRNAGYGYEGMDTHNPFDHYNQQ-DPFAMSNNIAPPANV 504
>Glyma09g06710.1
Length = 548
Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/111 (78%), Positives = 97/111 (87%), Gaps = 3/111 (2%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
MALAI+P G+NPNNLALS+I GT GWEL+LVTAPSNH++QAPDR+MAGGFDKLLLDSLY
Sbjct: 404 MALAIVPSGGNNPNNLALSNIDGTIGWELSLVTAPSNHSSQAPDRRMAGGFDKLLLDSLY 463
Query: 61 EDDNARRQHQLQMAGYGHGGV--PVENPFDHYNQQHDPFAMSSNIAPPTNV 109
ED+NARRQ QLQ AGYGHGG NPFDHYN QHDPFAMS+NIAPP +V
Sbjct: 464 EDENARRQLQLQNAGYGHGGTMDIHNNPFDHYN-QHDPFAMSNNIAPPPSV 513
>Glyma15g17910.1
Length = 580
Score = 171 bits (434), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 95/109 (87%), Gaps = 4/109 (3%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
MALAI+PP G+NPNNLALS+ GTTGWEL+LVT PSNH++QAPDR++AGGFDKLLLDSLY
Sbjct: 407 MALAIVPPGGNNPNNLALSNFDGTTGWELSLVTTPSNHSSQAPDRRLAGGFDKLLLDSLY 466
Query: 61 EDDNARRQHQLQMAGYGHGG---VPVENPFDHYNQQHDPFAMSSNIAPP 106
ED+NARRQ QLQ AGYGH G + NPFDHYNQQ DPFAMS+NIAPP
Sbjct: 467 EDENARRQLQLQNAGYGHSGTMDIQNNNPFDHYNQQ-DPFAMSNNIAPP 514
>Glyma13g00550.1
Length = 573
Score = 150 bits (380), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
+ALAI+PP ++ IG T+GWELALVT PS+HT+QAPDRKMAGGFDKLLLDSLY
Sbjct: 398 LALAIVPPGVSKWKREYMTYIG-TSGWELALVTTPSSHTSQAPDRKMAGGFDKLLLDSLY 456
Query: 61 EDDNARRQHQLQMAGYGHGGVPVENPFDHYNQQHDPFAMSSNIAPPTNV 109
ED+NARRQ QL+ AGYG+ G+ NPFDHYNQQ DPFAM SNIAPP NV
Sbjct: 457 EDENARRQLQLRNAGYGYEGMVTHNPFDHYNQQ-DPFAM-SNIAPPANV 503
>Glyma08g10050.1
Length = 568
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 15/120 (12%)
Query: 1 MALAILPPDGHNPNNLALSSIGGT----TGWELALVTAPSNHTNQAPDRKMAGGFDKLLL 56
+ALAI+P + + ++ TGWELALV+ PS + A +R++AGG D L L
Sbjct: 398 LALAIVPTETGTTSAFNTTAAQTKDFDPTGWELALVSTPSTDISAANERQLAGGLDSLTL 457
Query: 57 DSLYEDDNARRQHQLQMAGYGHGGVPVENPFDHYNQQHDPFAMSSNIAPPTNVQLALLAQ 116
+SLY++ R Q + G P NPF + DPFA+SS+I PP VQLA + Q
Sbjct: 458 NSLYDEAAYRSQQPVY-------GAPAPNPF----EMQDPFALSSSIPPPPAVQLAAMQQ 506
>Glyma17g11910.2
Length = 548
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 18/122 (14%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
+ALAI+P + A + GTTGWELALVTAPS++ K+AGG DKL LDSLY
Sbjct: 382 LALAIVPVAVEQQPSAASNQANGTTGWELALVTAPSSNETATAASKLAGGLDKLTLDSLY 441
Query: 61 EDDNARRQHQLQMAGYGHGGVPVENPFD-------HYNQQHDPFAMSSNIAPPTNVQLAL 113
DD RR + Q Y NP++ HDPF S+ +A P +VQ+A
Sbjct: 442 -DDALRRNN--QNVSY--------NPWEPAPGGNMMQPTMHDPFFASNTVAAPPSVQMAA 490
Query: 114 LA 115
++
Sbjct: 491 MS 492
>Glyma17g11910.1
Length = 548
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 18/122 (14%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
+ALAI+P + A + GTTGWELALVTAPS++ K+AGG DKL LDSLY
Sbjct: 382 LALAIVPVAVEQQPSAASNQANGTTGWELALVTAPSSNETATAASKLAGGLDKLTLDSLY 441
Query: 61 EDDNARRQHQLQMAGYGHGGVPVENPFD-------HYNQQHDPFAMSSNIAPPTNVQLAL 113
DD RR + Q Y NP++ HDPF S+ +A P +VQ+A
Sbjct: 442 -DDALRRNN--QNVSY--------NPWEPAPGGNMMQPTMHDPFFASNTVAAPPSVQMAA 490
Query: 114 LA 115
++
Sbjct: 491 MS 492
>Glyma05g27070.1
Length = 569
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 24/125 (19%)
Query: 1 MALAILPPDGHNPNNLALSSIGGT---------TGWELALVTAPSNHTNQAPDRKMAGGF 51
+ALAI+P + A S+ T TGWELALV+ PS + A +R++AGG
Sbjct: 398 LALAIVPTETG-----ATSAFNSTASQTKDFDPTGWELALVSTPSTDISAANERQLAGGL 452
Query: 52 DKLLLDSLYEDDNARRQHQLQMAGYGHGGVPVENPFDHYNQQHDPFAMSSNIAPPTNVQL 111
D L L+SLY D+ A R Q + G P NPF + DPFA+SS+I PP VQ+
Sbjct: 453 DSLTLNSLY-DEAAYRSAQQPVY-----GAPAPNPF----EVQDPFALSSSIPPPPAVQM 502
Query: 112 ALLAQ 116
A + Q
Sbjct: 503 AAMQQ 507
>Glyma13g22970.1
Length = 546
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 18/122 (14%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
+ALAI+P + + GTTGWELALVTAPS++ + K+AGG DKL LDSLY
Sbjct: 382 LALAIVPVAVEQQPSAVSNQANGTTGWELALVTAPSSNESATTASKLAGGLDKLTLDSLY 441
Query: 61 EDDNARRQHQLQMAGYGHGGVPVENPFD-------HYNQQHDPFAMSSNIAPPTNVQLAL 113
DD RR + Q Y NP++ HDPF S+ +A P +VQ+A
Sbjct: 442 -DDALRRNN--QNVSY--------NPWEPAPGGNMMQPTMHDPFFASNTVAAPPSVQMAS 490
Query: 114 LA 115
++
Sbjct: 491 MS 492
>Glyma09g21570.1
Length = 457
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 25 TGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHGGVPVE 84
T WE+ALV+ PS + + +R++AGG + L L SLY++ R Q VP
Sbjct: 321 TEWEIALVSTPSTNISSVNERQLAGGLNSLTLSSLYDEGAYRSAQQPVYV------VPAP 374
Query: 85 NPFDHYNQQHDPFAMSSNIAPPTNVQLALLAQ 116
NPF + DPFA+SS+I P + VQ+A +AQ
Sbjct: 375 NPF----EVQDPFALSSSIPPTSTVQMAAIAQ 402
>Glyma10g12430.1
Length = 438
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 20 SIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHG 79
S GTT ELALVTAPS++ + K+AGG D LDSLY +D RR + Q A Y
Sbjct: 348 SANGTTRIELALVTAPSSNESATATSKLAGGLDNRTLDSLY-NDALRRNN--QNASYD-- 402
Query: 80 GVPVENPFDHYNQQ---HDPFAMSSNIAPPTNVQLA 112
P E Q H+PF S+ IA P +VQ+A
Sbjct: 403 --PWEPALGGNMMQPTMHNPFFASNTIAAPPSVQMA 436
>Glyma13g22680.1
Length = 612
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 22 GGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQH--QLQMAGYGHG 79
G WELALV SN + Q D +AGGFD LLL+ +Y D A RQH Q++G
Sbjct: 438 AGKADWELALVENTSNLSRQKAD--LAGGFDPLLLNGMY-DQGAVRQHVSTTQLSGGSAS 494
Query: 80 GVPVENPF------------DHYNQQ---HDPFAMSSNIAPPTNVQLA 112
V + P D Q DPFA S + PP+ VQ+A
Sbjct: 495 SVALPGPGKSATPVLALPAPDGTVQAVGPQDPFAASLTVPPPSYVQIA 542
>Glyma15g05660.1
Length = 596
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 23/109 (21%)
Query: 23 GTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHGG-- 80
G WE LV + +N +NQ P GGFD LLLD +Y+ Q Q GYG G
Sbjct: 435 GAADWETTLVQSATNLSNQKP--TYGGGFDTLLLDGMYKQGEVNAAMQGQ--GYGVSGSA 490
Query: 81 -----------------VPVENPFDHYNQQHDPFAMSSNIAPPTNVQLA 112
P + + DPFA S +APP+ VQ++
Sbjct: 491 SSVALGSAGRPSMLALPAPPTSRSGSDSISSDPFAASLAVAPPSYVQMS 539
>Glyma05g24940.1
Length = 575
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 55/131 (41%), Gaps = 23/131 (17%)
Query: 1 MALAILPPDGHNPNN----LALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLL 56
+ALA+ DG P + L + WE ALV + SN +NQ P + GGFD LLL
Sbjct: 406 LALALF--DGALPTSATQALPWHAFDDAADWETALVQSSSNLSNQKP--SLGGGFDTLLL 461
Query: 57 DSLYEDDNARRQHQLQ-MAG------YGHGG--------VPVENPFDHYNQQHDPFAMSS 101
D +Y Q Q M G G G P + DPFA S
Sbjct: 462 DGMYRQAATNMQRQSHGMNGSASSVALGSAGRPAMLALPAPPTSGSGSSLDSADPFAASL 521
Query: 102 NIAPPTNVQLA 112
+APP VQ++
Sbjct: 522 AVAPPAYVQMS 532
>Glyma08g19330.1
Length = 593
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 23/105 (21%)
Query: 27 WELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHGG------ 80
WE ALV + +N NQ P GGFD LLLD +Y+ +Q GYG G
Sbjct: 437 WETALVQSATNLGNQKP--TYGGGFDTLLLDGMYK--QGEMNAAMQGQGYGVSGSASSVA 492
Query: 81 -------------VPVENPFDHYNQQHDPFAMSSNIAPPTNVQLA 112
P + + DPFA S +APP+ VQ++
Sbjct: 493 LGSAGRPAMLALPAPPTSWSGSDSNNSDPFAASLAVAPPSYVQMS 537
>Glyma04g07050.1
Length = 652
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 23 GTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQH------------Q 70
G WELALV SN + Q + GGFD LLL +Y D RQH
Sbjct: 482 GKADWELALVETASNLSKQKA--TLGGGFDPLLLTGMY-DQGMVRQHVSTTQLSGGSASS 538
Query: 71 LQMAGYGHGGVPV------ENPFDHYNQQHDPFAMSSNIAPPTNVQLA 112
+ + G G PV + NQ DPFA S ++ PP+ VQ+A
Sbjct: 539 VALPGPGKTTTPVLALPAPDGSVQPVNQ--DPFAASLSVPPPSYVQMA 584