Miyakogusa Predicted Gene

Lj6g3v1314090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1314090.1 tr|Q6I608|Q6I608_ORYSJ Os05g0556900 protein
OS=Oryza sativa subsp. japonica GN=OJ1214_E03.11 PE=1
SV,76.27,2e-19,Translation proteins,Translation elongation/initiation
factor/Ribosomal, beta-barrel; 60S RIBOSOMAL
,NODE_44211_length_208_cov_760.216370.path2.1
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g42080.2                                                       119   6e-28
Glyma02g42080.1                                                       119   6e-28
Glyma14g06820.4                                                       119   7e-28
Glyma14g06820.3                                                       119   7e-28
Glyma14g06820.2                                                       119   7e-28
Glyma14g06820.1                                                       119   7e-28
Glyma08g09200.2                                                       119   1e-27
Glyma08g09200.1                                                       119   1e-27
Glyma05g26290.1                                                       118   1e-27

>Glyma02g42080.2 
          Length = 160

 Score =  119 bits (298), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK++G+HYRCIWGKV RPHGNSG+VRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 102 MAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 160


>Glyma02g42080.1 
          Length = 160

 Score =  119 bits (298), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK++G+HYRCIWGKV RPHGNSG+VRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 102 MAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 160


>Glyma14g06820.4 
          Length = 112

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK+NG+HYRCIWGKV RPHGNSG+VRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>Glyma14g06820.3 
          Length = 112

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK+NG+HYRCIWGKV RPHGNSG+VRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>Glyma14g06820.2 
          Length = 112

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK+NG+HYRCIWGKV RPHGNSG+VRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>Glyma14g06820.1 
          Length = 112

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK+NG+HYRCIWGKV RPHGNSG+VRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>Glyma08g09200.2 
          Length = 112

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK++G+HYRCIWGKV RPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>Glyma08g09200.1 
          Length = 112

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK++G+HYRCIWGKV RPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>Glyma05g26290.1 
          Length = 112

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 58/59 (98%)

Query: 1   MAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 59
           MAYIYKAKVK+NG+HYRCIWGKV RPHGNSG+VRAKFKSNLPP+SMGARVRVFMYPSNI
Sbjct: 54  MAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 112