Miyakogusa Predicted Gene

Lj6g3v1303010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1303010.1 Non Chatacterized Hit- tr|G7IID1|G7IID1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,55.96,3e-19,seg,NULL,
NODE_62377_length_577_cov_19.405546.path2.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g18280.1                                                        87   5e-18
Glyma09g07010.1                                                        83   6e-17
Glyma17g06440.1                                                        63   6e-11

>Glyma15g18280.1 
          Length = 119

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 63/111 (56%), Gaps = 9/111 (8%)

Query: 1   MGIENYEEFXXXXXXXXXXXXXXAKTSFKHVTETELFNAEKTEEHKNE---VDEECCTPT 57
           MG+E  EEF               +T+ KH    +L     T+E  NE   ++EEC TPT
Sbjct: 1   MGLEILEEFRPITPIRTVVPT--VRTTLKH----DLGTTTTTKEVLNEDVLIEEECHTPT 54

Query: 58  SPTQTLRIEQLVCPPAPKKPRLTRRNKNSAAPPCQGFFQVTHDLASVFVIR 108
           SP+Q L    LVCPPAPKKPR+  R  N   P  QGFF+V HDLASVFV+R
Sbjct: 55  SPSQKLSTNPLVCPPAPKKPRVVPRRHNLDPPSQQGFFKVPHDLASVFVLR 105


>Glyma09g07010.1 
          Length = 121

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 1   MGIENYEEFXXXXXXXXXXXXXXAKTSFKHVTETELFNAEKTEEHKNEVDEECCTPTSPT 60
           MG+E  EEF               +T+ KH   T     ++       ++EEC TPTSP+
Sbjct: 1   MGLEILEEFRPITPIRTVVPT--VRTTLKHDLGTTTTTTKEVLNEDVVIEEECHTPTSPS 58

Query: 61  QTLRIEQLVCPPAPKKPRLT-RRNKNSAAPPCQGFFQVTHDLASVFVIR 108
           Q L    LVCPPAPKKPR+  RR KN   P  +GFFQV HDLASVFV+R
Sbjct: 59  QKLPTNPLVCPPAPKKPRVVPRRLKNLDPPSQEGFFQVPHDLASVFVLR 107


>Glyma17g06440.1 
          Length = 111

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 13/91 (14%)

Query: 34  TELFNAEKTEEHKNEVDEECCTPTSPT---QTLRIEQLVCPPAPKKPRLTRRNKNSAAPP 90
           +EL  A   EE    + +EC TPTS +   QTL    LVCPP PKKPR++RR  +S +  
Sbjct: 30  SELVEASAKEEM---LVQECHTPTSSSKVAQTL----LVCPPPPKKPRVSRRTSHSHS-- 80

Query: 91  CQGFFQVTH-DLASVFVIRKSIVLPNKIKAS 120
             GFFQV H DLASVF++R    +P K+ AS
Sbjct: 81  QAGFFQVPHDDLASVFLLRTKPSVPRKLFAS 111