Miyakogusa Predicted Gene

Lj6g3v1269750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1269750.1 CUFF.59302.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g47200.1                                                       120   9e-28
Glyma18g38440.1                                                       113   1e-25

>Glyma08g47200.1 
          Length = 626

 Score =  120 bits (300), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 63/66 (95%), Gaps = 1/66 (1%)

Query: 46  KIRASLQG-NAENLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCSDLSSPQWTNLSLHKNP 104
           KI+ASLQG N++NLVLSSWNSS PLCQW GLKWVFSNG+PLSC+DLSSPQWTNL+LHK+P
Sbjct: 23  KIKASLQGSNSDNLVLSSWNSSTPLCQWSGLKWVFSNGTPLSCTDLSSPQWTNLTLHKDP 82

Query: 105 SLHLLS 110
           SLHLLS
Sbjct: 83  SLHLLS 88


>Glyma18g38440.1 
          Length = 699

 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 61/66 (92%), Gaps = 1/66 (1%)

Query: 46  KIRASLQG-NAENLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCSDLSSPQWTNLSLHKNP 104
           KI+ASLQG N++NLVLSSWNSS PLCQW+GL WVFSNG+PLSC+DLSSPQWTNL+L K+P
Sbjct: 59  KIKASLQGSNSDNLVLSSWNSSTPLCQWKGLIWVFSNGTPLSCTDLSSPQWTNLTLLKDP 118

Query: 105 SLHLLS 110
           SLHL S
Sbjct: 119 SLHLFS 124