Miyakogusa Predicted Gene
- Lj6g3v1226320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1226320.1 Non Chatacterized Hit- tr|I3STA5|I3STA5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.51,0,coiled-coil,NULL; Utp11,Small-subunit processome, Utp11;
U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 1,CUFF.59271.1
(203 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g08210.1 340 4e-94
Glyma05g25190.2 317 5e-87
Glyma05g25190.1 307 5e-84
>Glyma08g08210.1
Length = 229
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/203 (79%), Positives = 187/203 (92%)
Query: 1 MSSLRNALPRRAHKERAQPSSRKKFGHLEKHKDYVERAKAFHKKEETLRILREKAANRNQ 60
MSSLRNA+PRRAHKER+QPSSRKKFG LEKHKDY++RAKAFHKKE+TLR LREKAANRN+
Sbjct: 1 MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLREKAANRNE 60
Query: 61 DEFYFKMIRTRTEDGVHRPESEANKYTQDELMLMKTQDLGYVLQKLQSERKKIEKLAASL 120
DEFYFKM+RT+T DGVH+PESEANKYTQ+ELMLMKTQD+GY+LQK+QSER KIE+L ASL
Sbjct: 61 DEFYFKMVRTKTVDGVHKPESEANKYTQEELMLMKTQDMGYILQKIQSERNKIERLTASL 120
Query: 121 HSIDNQPTNKHILFAEDREEAKELQSQYSRSEIPLISDNIHTNIKRKIDRSYKELEARRT 180
HSIDNQP NKH+ FAEDREEAKEL+S++ +S+IPL S +I IKRK DRSY+ELEARR
Sbjct: 121 HSIDNQPANKHVFFAEDREEAKELESRHQKSKIPLTSGDIPAGIKRKTDRSYQELEARRG 180
Query: 181 RLSQLQKMYMDMSMKKELQKNGR 203
RLSQL+K+YMDM+M+KELQK GR
Sbjct: 181 RLSQLEKIYMDMTMQKELQKKGR 203
>Glyma05g25190.2
Length = 229
Score = 317 bits (812), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/203 (78%), Positives = 185/203 (91%)
Query: 1 MSSLRNALPRRAHKERAQPSSRKKFGHLEKHKDYVERAKAFHKKEETLRILREKAANRNQ 60
MSSLRNA+PRRAHKER+QPSSRKKFG LEKHKDYV+RAKAFHKKE TLR LREKAANRN+
Sbjct: 1 MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYVQRAKAFHKKEGTLRKLREKAANRNE 60
Query: 61 DEFYFKMIRTRTEDGVHRPESEANKYTQDELMLMKTQDLGYVLQKLQSERKKIEKLAASL 120
DEFYFKM+RT+T DGVH+PESEANKYTQ ELMLMKTQD+GY+LQK+QSER KIE+L ASL
Sbjct: 61 DEFYFKMVRTKTVDGVHKPESEANKYTQQELMLMKTQDMGYILQKIQSERNKIERLTASL 120
Query: 121 HSIDNQPTNKHILFAEDREEAKELQSQYSRSEIPLISDNIHTNIKRKIDRSYKELEARRT 180
HSID QP NKH+LFAE+REEAKEL+SQY +S+IP S++I IKRK +SY+ELEARR+
Sbjct: 121 HSIDKQPVNKHVLFAEEREEAKELESQYQKSKIPFTSEDIPAGIKRKTAQSYQELEARRS 180
Query: 181 RLSQLQKMYMDMSMKKELQKNGR 203
RL+QL+K+YMDM+M+KELQK GR
Sbjct: 181 RLNQLEKIYMDMAMQKELQKKGR 203
>Glyma05g25190.1
Length = 251
Score = 307 bits (786), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 186/225 (82%), Gaps = 22/225 (9%)
Query: 1 MSSLRNALPRRAHKERAQPSSRKKFGHLEKHKDYVERAKAFHKKEETLRI---------- 50
MSSLRNA+PRRAHKER+QPSSRKKFG LEKHKDYV+RAKAFHKKE TLR+
Sbjct: 1 MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYVQRAKAFHKKEGTLRVPFYSFLFLQL 60
Query: 51 ------------LREKAANRNQDEFYFKMIRTRTEDGVHRPESEANKYTQDELMLMKTQD 98
LREKAANRN+DEFYFKM+RT+T DGVH+PESEANKYTQ ELMLMKTQD
Sbjct: 61 LIPSTVNNFLQKLREKAANRNEDEFYFKMVRTKTVDGVHKPESEANKYTQQELMLMKTQD 120
Query: 99 LGYVLQKLQSERKKIEKLAASLHSIDNQPTNKHILFAEDREEAKELQSQYSRSEIPLISD 158
+GY+LQK+QSER KIE+L ASLHSID QP NKH+LFAE+REEAKEL+SQY +S+IP S+
Sbjct: 121 MGYILQKIQSERNKIERLTASLHSIDKQPVNKHVLFAEEREEAKELESQYQKSKIPFTSE 180
Query: 159 NIHTNIKRKIDRSYKELEARRTRLSQLQKMYMDMSMKKELQKNGR 203
+I IKRK +SY+ELEARR+RL+QL+K+YMDM+M+KELQK GR
Sbjct: 181 DIPAGIKRKTAQSYQELEARRSRLNQLEKIYMDMAMQKELQKKGR 225