Miyakogusa Predicted Gene

Lj6g3v1201450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201450.1 Non Chatacterized Hit- tr|I3SFU1|I3SFU1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,96.06,0,Snf7,Snf7; CHARGED MULTIVESICULAR BODY PROTEIN 2A
(CHROMATIN-MODIFYING PROTEIN 2A)(CHMP2A)(VACUOLAR ,CUFF.59247.1
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g19000.1                                                       298   3e-81
Glyma09g07920.1                                                       298   3e-81
Glyma17g05880.1                                                       284   4e-77
Glyma13g16820.1                                                       166   2e-41
Glyma03g32180.1                                                       105   3e-23
Glyma15g22150.1                                                       105   3e-23
Glyma09g10020.1                                                       105   3e-23
Glyma19g34940.1                                                       105   5e-23
Glyma07g04120.1                                                        90   2e-18
Glyma06g23570.2                                                        60   3e-09
Glyma06g23570.1                                                        60   3e-09
Glyma04g21900.1                                                        59   4e-09
Glyma12g08510.1                                                        58   1e-08
Glyma11g19930.1                                                        49   3e-06

>Glyma15g19000.1 
          Length = 223

 Score =  298 bits (764), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 155/203 (76%), Positives = 163/203 (80%)

Query: 1   MLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK 60
           MLDKSIREIERERQGLQ QEKKLI EIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK
Sbjct: 21  MLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK 80

Query: 61  SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELT+
Sbjct: 81  SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTS 140

Query: 121 EVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNXXXXXXXXXXXXTKVPQVE 180
           E+M                    VNQVLDEIGI++NQEL+N            TKVPQVE
Sbjct: 141 EMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELVNAPSSAVAAPASKTKVPQVE 200

Query: 181 TAATDDGGIDSDLQARPHNISRI 203
           T   DDGGIDSDLQAR  N+ ++
Sbjct: 201 TTGNDDGGIDSDLQARLDNLRKM 223


>Glyma09g07920.1 
          Length = 223

 Score =  298 bits (764), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 155/203 (76%), Positives = 163/203 (80%)

Query: 1   MLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK 60
           MLDKSIREIERERQGLQ QEKKLI EIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK
Sbjct: 21  MLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK 80

Query: 61  SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELT+
Sbjct: 81  SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTS 140

Query: 121 EVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNXXXXXXXXXXXXTKVPQVE 180
           E+M                    VNQVLDEIGI++NQEL+N            TKVPQVE
Sbjct: 141 EMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQVE 200

Query: 181 TAATDDGGIDSDLQARPHNISRI 203
           T   DDGGIDSDLQAR  N+ ++
Sbjct: 201 TTGNDDGGIDSDLQARLDNLRKM 223


>Glyma17g05880.1 
          Length = 223

 Score =  284 bits (727), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 146/203 (71%), Positives = 160/203 (78%)

Query: 1   MLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLK 60
           MLDKSIREI+RERQGLQ+QEKKLILEIKKSAKQGQMGAV+VMAKDLVRT+HQ+EKFYKLK
Sbjct: 21  MLDKSIREIDRERQGLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTKHQIEKFYKLK 80

Query: 61  SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMG MNRQMNLPSLQKI+QEFE QNE+MEL T
Sbjct: 81  SQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGHMNRQMNLPSLQKILQEFETQNERMELIT 140

Query: 121 EVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNXXXXXXXXXXXXTKVPQVE 180
           EVM                    VNQVLDEIGI++NQELL+            TKVPQVE
Sbjct: 141 EVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINQELLSAPSTAVAASAAKTKVPQVE 200

Query: 181 TAATDDGGIDSDLQARPHNISRI 203
           T   DD  IDS+LQAR  N+ ++
Sbjct: 201 TVGNDDATIDSNLQARLDNLRKM 223


>Glyma13g16820.1 
          Length = 245

 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/175 (54%), Positives = 107/175 (61%), Gaps = 13/175 (7%)

Query: 36  MGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNR 95
           MGAV+VMAKDLVRTRHQ+EKFYKLKSQLQG      TLKSTQAMGEAMKGVTKAMG MNR
Sbjct: 73  MGAVKVMAKDLVRTRHQIEKFYKLKSQLQG------TLKSTQAMGEAMKGVTKAMGHMNR 126

Query: 96  QMNLPSLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQ----VLDEI 151
           QMNL SLQKI+QEFE QNE+MEL TEV                     VNQ    +L   
Sbjct: 127 QMNLSSLQKILQEFETQNERMELITEVTRDAIDDALEGDEEEEETEDLVNQQEVCILIPC 186

Query: 152 GINVN---QELLNXXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQARPHNISRI 203
            ++     + LLN            TKVPQV T   D   IDS LQAR  N+ ++
Sbjct: 187 SLHFFFQLKALLNAPSNAVAASATKTKVPQVGTVGKDAAAIDSYLQARLCNLRKM 241


>Glyma03g32180.1 
          Length = 212

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 91/153 (59%)

Query: 7   REIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGV 66
           R IE+E   LQ++EKKL+ EIK++AK G   A +++A+ L+R R Q+      ++Q++G+
Sbjct: 26  RGIEKEIGALQSEEKKLVAEIKRTAKTGNEAATKILARQLIRLRQQIANLQGSRAQMRGI 85

Query: 67  SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTTEVMXXX 126
           +   Q + +  ++   +KG TKAM  MN++M      KI+Q+F++Q+ +M++TTE+M   
Sbjct: 86  ATHTQAMHAHSSVAVGLKGATKAMAAMNKKMEPAKQAKIIQDFQKQSAQMDMTTEMMSDA 145

Query: 127 XXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 159
                             NQVLDEIG++V  +L
Sbjct: 146 IDDALDNDEAEEETEELTNQVLDEIGVDVASQL 178


>Glyma15g22150.1 
          Length = 217

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 90/155 (58%)

Query: 5   SIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQ 64
           + R IERE   LQ +EKKL+ EIK+ AK G   A R++A+ LVR R Q+      ++Q++
Sbjct: 24  ATRGIEREITSLQMEEKKLVAEIKREAKTGNEAATRILARQLVRLRQQITNLQGSRAQIR 83

Query: 65  GVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTTEVMX 124
           GV+   Q L ++ ++   MKG TKAM  MN+QM      K+++EF++Q+ ++++T E+M 
Sbjct: 84  GVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQVKVIKEFQKQSAQLDMTIEMMS 143

Query: 125 XXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 159
                               NQVLDEIG+++  +L
Sbjct: 144 ESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 178


>Glyma09g10020.1 
          Length = 219

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 90/155 (58%)

Query: 5   SIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQ 64
           + R IERE   LQ +EKKL+ EIK+ AK G   A R++A+ LVR R Q+      ++Q++
Sbjct: 26  ATRGIEREIASLQMEEKKLVAEIKREAKTGNEAATRILARQLVRLRQQITNLQGSRAQIR 85

Query: 65  GVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTTEVMX 124
           GV+   Q L ++ ++   MKG TKAM  MN+QM      K+++EF++Q+ ++++T E+M 
Sbjct: 86  GVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQVKVIKEFQKQSAQLDMTIEMMS 145

Query: 125 XXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 159
                               NQVLDEIG+++  +L
Sbjct: 146 ESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 180


>Glyma19g34940.1 
          Length = 212

 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 91/155 (58%)

Query: 5   SIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQ 64
           + R IE+E   LQ +EKKL+ EIK++AK G   A +++A+ L+R R Q+      ++Q++
Sbjct: 24  ATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLIRLRQQIANLQGSRAQMR 83

Query: 65  GVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTTEVMX 124
           G++   Q + +  ++   +KG TKAM  MN+QM      KI+Q+F++Q+ +M++TTE+M 
Sbjct: 84  GIATHTQAMHAHSSVAVGLKGATKAMVAMNKQMEPAKQAKIIQDFQKQSAQMDMTTEMMS 143

Query: 125 XXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 159
                               NQVLDEIG++V  +L
Sbjct: 144 DAIDDALDNDEAEEETEELTNQVLDEIGVDVASQL 178


>Glyma07g04120.1 
          Length = 197

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 88/208 (42%), Gaps = 56/208 (26%)

Query: 41  VMAKDLVRTRHQVEKF----------------------YK------------LKSQLQG- 65
           +MAKDL+RTRHQ+EK                       YK            L SQ+   
Sbjct: 1   MMAKDLIRTRHQIEKVCFKLGILFNTRLSMVDGKKALPYKHVIVAYGTAIVGLPSQIAYG 60

Query: 66  ---------VSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKM 116
                    V  ++ TLKSTQAMGEA KG+TKAMGQMNR            EF    E  
Sbjct: 61  RGVEKCHVIVFWQLATLKSTQAMGEATKGITKAMGQMNRWT--------ADEFAFCTED- 111

Query: 117 ELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNX-XXXXXXXXXXXTK 175
                VM                    VNQ LDEIGI++N EL+N              +
Sbjct: 112 --DARVMGDAIDDALEGGEEEEETEELVNQFLDEIGIDINSELVNAPATTSVSAPAAKNR 169

Query: 176 VPQVETAATDDGGIDSDLQARPHNISRI 203
           V Q E+ A +D GI  DLQAR +N+ ++
Sbjct: 170 VAQAESTANEDSGIYDDLQARLNNLRKM 197


>Glyma06g23570.2 
          Length = 227

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 2   LDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKS 61
           L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +AK+LVR+R  V + Y+ K+
Sbjct: 25  LRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRQTVNRLYENKA 84

Query: 62  QLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           Q+  +S+ + +++   + +G   K   + M  +N  M  P +   MQEF ++  K  +  
Sbjct: 85  QMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIE 143

Query: 121 EVM 123
           E++
Sbjct: 144 EIV 146


>Glyma06g23570.1 
          Length = 227

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 2   LDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKS 61
           L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +AK+LVR+R  V + Y+ K+
Sbjct: 25  LRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRQTVNRLYENKA 84

Query: 62  QLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           Q+  +S+ + +++   + +G   K   + M  +N  M  P +   MQEF ++  K  +  
Sbjct: 85  QMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIE 143

Query: 121 EVM 123
           E++
Sbjct: 144 EIV 146


>Glyma04g21900.1 
          Length = 227

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 2   LDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKS 61
           L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +AK+LVR+R  V + Y+ K+
Sbjct: 25  LRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRKTVNRLYENKA 84

Query: 62  QLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           Q+  +S+ + +++   + +G   K   + M  +N  M  P +   MQEF ++  K  +  
Sbjct: 85  QMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIE 143

Query: 121 EVM 123
           E++
Sbjct: 144 EIV 146


>Glyma12g08510.1 
          Length = 228

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 2   LDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKS 61
           L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +AK+LVR+R  V + Y+ K+
Sbjct: 25  LRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRKTVNRLYENKA 84

Query: 62  QLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTT 120
           Q+  +S+ + +++   + +G   K   + M  +N  +  P +   MQEF ++  K  +  
Sbjct: 85  QMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLIKAPEMAVTMQEFSKEMTKAGVIE 143

Query: 121 EVM 123
           E++
Sbjct: 144 EIV 146


>Glyma11g19930.1 
          Length = 229

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 2   LDKSIREIERERQGLQAQEKKLILE--IKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKL 59
           L +  R IER+ + L  +EKK  ++  I+++AK+  MG+ + + K+LVR+R  V + Y+ 
Sbjct: 25  LRQQCRNIERQIRVLIYREKKKNVQKAIREAAKRNDMGSAKALTKELVRSRKTVNRLYEN 84

Query: 60  KSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEL 118
           K+Q+  +S+ + +++   + +G   K   + M  +N     P +   MQEF ++  K  +
Sbjct: 85  KAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLTKAPEMAVAMQEFSKEMTKAGV 143

Query: 119 TTEVM 123
             E++
Sbjct: 144 IEEIV 148