Miyakogusa Predicted Gene

Lj6g3v1201360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201360.1 Non Chatacterized Hit- tr|K4A1U8|K4A1U8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si032843,38.1,8e-17,seg,NULL; S_R_A_B_BARREL,Stress responsive
alpha-beta barrel; Stress responsive A/B Barrel Domain,St,CUFF.59239.1
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g05840.2                                                       192   3e-49
Glyma17g05840.1                                                       192   3e-49
Glyma15g19370.1                                                       178   4e-45
Glyma13g16870.1                                                       173   2e-43
Glyma11g32850.1                                                        75   5e-14
Glyma11g06530.1                                                        71   7e-13
Glyma17g05850.1                                                        57   1e-08

>Glyma17g05840.2 
          Length = 253

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/211 (53%), Positives = 137/211 (64%), Gaps = 19/211 (9%)

Query: 4   AASHAVEHIVLIRVKDDVEPSKVND----IRSLATLDQVRHLTVGPVLRSHATTTNATSD 59
           A++  VEHIVL +VK++ EPSKV+D    + SL +LD V HL+VGP+LR      N +S 
Sbjct: 33  ASTKTVEHIVLFKVKEETEPSKVSDMVNGLGSLVSLDPVLHLSVGPLLR------NRSSA 86

Query: 60  LRFTHLLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGDEDALPPH-PTP 118
           L FTH+LHSRY SKEDLEAY+AHP H+  V+G + PI  D+M+VDW  D+ A     P P
Sbjct: 87  LTFTHMLHSRYKSKEDLEAYSAHPSHVSVVKGYVLPIIDDIMSVDWVADDLATASLVPPP 146

Query: 119 GSAIRVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIASLA 178
           GSA+RVSFLKLK+ A    KD VL  VR +              NFSP  AKG SIASLA
Sbjct: 147 GSAVRVSFLKLKEDAD---KDTVLGVVRGIPESFKQISEFSLGENFSPGRAKGFSIASLA 203

Query: 179 VFPGRKELEEVDPNEWLV-----KVREHLES 204
           VFPG +ELE VD NE LV     KVR+ +ES
Sbjct: 204 VFPGPRELEAVDSNEELVNYQKDKVRDQIES 234


>Glyma17g05840.1 
          Length = 253

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/211 (53%), Positives = 137/211 (64%), Gaps = 19/211 (9%)

Query: 4   AASHAVEHIVLIRVKDDVEPSKVND----IRSLATLDQVRHLTVGPVLRSHATTTNATSD 59
           A++  VEHIVL +VK++ EPSKV+D    + SL +LD V HL+VGP+LR      N +S 
Sbjct: 33  ASTKTVEHIVLFKVKEETEPSKVSDMVNGLGSLVSLDPVLHLSVGPLLR------NRSSA 86

Query: 60  LRFTHLLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGDEDALPPH-PTP 118
           L FTH+LHSRY SKEDLEAY+AHP H+  V+G + PI  D+M+VDW  D+ A     P P
Sbjct: 87  LTFTHMLHSRYKSKEDLEAYSAHPSHVSVVKGYVLPIIDDIMSVDWVADDLATASLVPPP 146

Query: 119 GSAIRVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIASLA 178
           GSA+RVSFLKLK+ A    KD VL  VR +              NFSP  AKG SIASLA
Sbjct: 147 GSAVRVSFLKLKEDAD---KDTVLGVVRGIPESFKQISEFSLGENFSPGRAKGFSIASLA 203

Query: 179 VFPGRKELEEVDPNEWLV-----KVREHLES 204
           VFPG +ELE VD NE LV     KVR+ +ES
Sbjct: 204 VFPGPRELEAVDSNEELVNYQKDKVRDQIES 234


>Glyma15g19370.1 
          Length = 209

 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/183 (55%), Positives = 121/183 (66%), Gaps = 10/183 (5%)

Query: 18  KDDVEPSKVNDI----RSLATLDQVRHLTVGPVLRSHATTTNATSDLRFTHLLHSRYDSK 73
           KDD EP+KVN +     SLAT+D V+HLTVGP+LR+  TTT  TS LRFTH+LH+RY+SK
Sbjct: 19  KDDTEPTKVNAMVNAMNSLATIDGVKHLTVGPLLRNGPTTT--TSGLRFTHMLHNRYNSK 76

Query: 74  EDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGDEDALPPHPTPGSAIRVSFLKLKDGA 133
           E LE YN HP H+ A  G LFP+C DLM VDW      LPP    GSA+RVSFLKLK+  
Sbjct: 77  EALEVYNKHPSHVNA--GFLFPVCDDLMVVDWVAGGVNLPPL-AKGSALRVSFLKLKESI 133

Query: 134 GGEVKDEVLDAVRKMRXXXXXXX-XXXXXXNFSPEWAKGLSIASLAVFPGRKELEEVDPN 192
             EVKDE L  VR M               NFSPE AKG ++ASLAVFP R+EL+ V+ +
Sbjct: 134 YEEVKDEALSVVRGMEHGVAGVLWQFSYDENFSPERAKGFTLASLAVFPEREELQSVELD 193

Query: 193 EWL 195
           E L
Sbjct: 194 EGL 196


>Glyma13g16870.1 
          Length = 218

 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 133/214 (62%), Gaps = 17/214 (7%)

Query: 9   VEHIVLIRVKDDVEPSK----VNDIRSLATLDQVRHLTVGPVLRSHATTTNATSDLRFTH 64
           +EH+VL +VK+DV PS+    V  I SLA+L+Q+ HLTVGP+ R       +   L+FTH
Sbjct: 4   IEHVVLFKVKEDVAPSEADTMVERINSLASLEQLLHLTVGPLFR----IRTSPPSLKFTH 59

Query: 65  LLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGD--EDALPPHPTPGSAI 122
             H+R++SK+DL +Y AHP H+  V+ +  P+  D MA+DW  +     +PP   PGSA+
Sbjct: 60  FFHTRFNSKDDLRSYVAHPAHVAVVKANT-PLVDDAMALDWLAEVPGGTVPP---PGSAL 115

Query: 123 RVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIASLAVFPG 182
           RV+F KLK+G    VKDE++ A+R  +             NFSP  AKG SIASL VFPG
Sbjct: 116 RVTFFKLKEGVEDRVKDEIVGAMRGFQREFKQAIQLTCGGNFSPARAKGFSIASLEVFPG 175

Query: 183 RKELE---EVDPNEWLVKVREHLESVVVVDYVLP 213
             ELE   E+       K++EHLESV+V+DYV+P
Sbjct: 176 LSELEAAKELGDYHKNEKIKEHLESVMVLDYVVP 209


>Glyma11g32850.1 
          Length = 125

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 41/156 (26%)

Query: 65  LLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGDEDALPPHPTPGSAIRV 124
           +LHS Y SK+DL+AY AHP H   ++G++ PI  DL  +                  + V
Sbjct: 1   MLHSLYKSKDDLKAYFAHPSHDSIIKGNMLPIINDLTDLITLS-----------SFVVHV 49

Query: 125 SFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAK-----GLSIASLAV 179
           SFLKLK+      KDEVL   R +                 P+ +K     G  IASL V
Sbjct: 50  SFLKLKEDTD---KDEVLGVARGI-----------------PKSSKHISDQGFLIASLVV 89

Query: 180 FPGRKELEEVDPNEWLV-----KVREHLESVVVVDY 210
           F G +ELE +D NE L      KV++ ++SVV V+Y
Sbjct: 90  FLGPRELEAMDSNEELENYQKDKVKDQIKSVVAVNY 125


>Glyma11g06530.1 
          Length = 89

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 8/74 (10%)

Query: 76  LEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGDE---DALPPHPTPGSAIRVSFLKLKDG 132
           LEAY+AHP H+  V+G++ PI  D+M VD   D+   D L   P  GSAIR+SFLKLK+ 
Sbjct: 11  LEAYSAHPSHVSIVKGNMLPIINDIMTVDSIADDLSTDNLV--PLLGSAIRISFLKLKED 68

Query: 133 AGGEVKDEVLDAVR 146
           A    KDEVL AV+
Sbjct: 69  AN---KDEVLSAVK 79


>Glyma17g05850.1 
          Length = 161

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)

Query: 122 IRVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIASLAVFP 181
           +RV+F KLK+G G  VKDEVL A+R ++             NFSP  AKG  IASL VFP
Sbjct: 101 LRVTFFKLKEGVGEHVKDEVLGAIRGIQ----RKFQFTCGGNFSPARAKGFFIASLEVFP 156

Query: 182 GRKE 185
           G  E
Sbjct: 157 GLNE 160