Miyakogusa Predicted Gene

Lj6g3v1201340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201340.1 tr|B1B3F3|B1B3F3_LOTJA R2R3-MYB transcription
factor LjTT2b OS=Lotus japonicus GN=LjTT2b PE=2
SV=2,53.16,0.000000001, ,CUFF.59237.1
         (120 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g16890.1                                                        51   3e-07

>Glyma13g16890.1 
          Length = 319

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 15/114 (13%)

Query: 10  AKLLEEAEGEPLLSAVANDFTSGDED-GVLSFDPCGNEKELSTDLLLDLDIGEICLPEFI 68
           +K   EAE   +   ++N       D G LSF     EKELSTD L+D ++G++CL + +
Sbjct: 181 SKTEAEAEARLVDGVISNQMEHTTYDNGFLSFP--DEEKELSTDFLIDFNVGDVCLSDLL 238

Query: 69  NSDFSYVCDFS---YNTHEDL--------MLFSENTLV-QAQKYLGDETNLVNN 110
           NSDFS   +FS    N HE L         +FS+  L         DE N  NN
Sbjct: 239 NSDFSNTYNFSCTNVNHHEQLSPCSDQPDAMFSDEVLKDWTHSNFADEANASNN 292