Miyakogusa Predicted Gene

Lj6g3v1177360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177360.1 tr|B9VI84|B9VI84_ORYSJ Truncated keratin
associated protein OS=Oryza sativa subsp. japonica GN=pay1
,42.61,7e-17,G-gamma,G-protein gamma-like domain; seg,NULL;
coiled-coil,NULL,CUFF.59209.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g19630.1                                                       147   4e-36
Glyma17g05640.1                                                       132   2e-31
Glyma07g04510.1                                                        83   1e-16
Glyma09g08130.1                                                        54   7e-08

>Glyma15g19630.1 
          Length = 177

 Score =  147 bits (372), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 77/86 (89%)

Query: 17  MPLPSPKAPLGCPDLYGKRRQTAKIQMLEREISFLEEELKSSEGLQPASRCCKEIDDFVI 76
           +P P+PKAP G PDLY KRR+TAKIQMLEREISFLEEELKSSEGLQPASRCCKEI DFV+
Sbjct: 10  LPSPTPKAPSGYPDLYRKRRETAKIQMLEREISFLEEELKSSEGLQPASRCCKEIADFVM 69

Query: 77  ANSDPLLPTSKKNRRSCRFWKWLCRM 102
           ANSDPLLPTSKKN +SC  WKWLC +
Sbjct: 70  ANSDPLLPTSKKNHQSCSLWKWLCDI 95


>Glyma17g05640.1 
          Length = 228

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/73 (82%), Positives = 69/73 (94%)

Query: 30  DLYGKRRQTAKIQMLEREISFLEEELKSSEGLQPASRCCKEIDDFVIANSDPLLPTSKKN 89
           DLYGKRR+TA++ MLEREI+FLEEELKS EGLQPASRCCKEI D+V+AN+DPLLP++KKN
Sbjct: 29  DLYGKRRETARVHMLEREITFLEEELKSVEGLQPASRCCKEIADYVMANADPLLPSTKKN 88

Query: 90  RRSCRFWKWLCRM 102
           RRSCRFWKWLC M
Sbjct: 89  RRSCRFWKWLCGM 101


>Glyma07g04510.1 
          Length = 160

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 8  NTSSREPSSMPLPSPKAPL-GCPDLYGKRRQTAKIQMLEREISFLEEELKSSEGLQPASR 66
           T+S   S   +  PK+PL G  D +GKR+Q  KIQ+LEREI  L+E LKS EGL PASR
Sbjct: 11 TTTSLSSSMEQVMRPKSPLPGLVDFHGKRKQMVKIQVLEREIGLLQE-LKSLEGLNPASR 69

Query: 67 CCKEIDDFVIANSDPLLPTSKKN 89
          CCKE+D FV + SDP  PT K+ 
Sbjct: 70 CCKELDAFVDSVSDPFTPTRKQT 92


>Glyma09g08130.1 
          Length = 42

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/29 (86%), Positives = 26/29 (89%)

Query: 24 APLGCPDLYGKRRQTAKIQMLEREISFLE 52
          AP  CPDLYGKRR+ AKIQMLEREISFLE
Sbjct: 2  APPSCPDLYGKRREMAKIQMLEREISFLE 30