Miyakogusa Predicted Gene

Lj6g3v1177310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177310.1 tr|G7IGG7|G7IGG7_MEDTR
Methylthioribose-1-phosphate isomerase OS=Medicago truncatula
GN=MTR_2g042450,85.16,0,IF-2B,Initiation factor 2B-related; no
description,NULL; seg,NULL; Salvage_MtnA,Putative
translation,CUFF.59203.1
         (375 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g08190.1                                                       356   2e-98
Glyma15g19690.1                                                       251   7e-67
Glyma11g21540.1                                                        54   4e-07
Glyma11g21540.2                                                        53   4e-07

>Glyma09g08190.1 
          Length = 286

 Score =  356 bits (914), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 179/227 (78%), Positives = 192/227 (84%), Gaps = 2/227 (0%)

Query: 6   SNELTGTNTLQSIRYNRGSLQLLDQRKLPLETIYLEIRDSTDGWNAIRDMVVRGXXXXXX 65
           SNE+  T TLQ+I Y RGSLQLLDQRKLPLET+YLEIRDSTDGWNAIR+MVVRG      
Sbjct: 5   SNEVAAT-TLQAICYKRGSLQLLDQRKLPLETVYLEIRDSTDGWNAIREMVVRGAPAIAI 63

Query: 66  XXXXXXXVEVSNLGDFSGSPSDAASFLQNKLEYLVSSRPTAVNLSDAATKLKEVISGAAA 125
                  VEV NL DF+GS +DA S LQ KLEYLV+SRPTAVNLSDAATKLKEVIS AAA
Sbjct: 64  AAALSLAVEVFNL-DFNGSATDAVSLLQKKLEYLVTSRPTAVNLSDAATKLKEVISNAAA 122

Query: 126 TASEAKSVFQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKPKLSVLTHCNTGSLAT 185
           T SE +SVFQ YI+AAE+ML DDVASNRAIGSYGA+ IQ Q EK KLSVLTHCNTGSLAT
Sbjct: 123 TTSEGRSVFQVYIDAAEVMLEDDVASNRAIGSYGASIIQQQTEKQKLSVLTHCNTGSLAT 182

Query: 186 AGYGTALGVIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIP 232
           AGYGTALGVIRALHS G L+RAYCTETRPFNQGSRLTAFELVH+KIP
Sbjct: 183 AGYGTALGVIRALHSAGVLKRAYCTETRPFNQGSRLTAFELVHEKIP 229


>Glyma15g19690.1 
          Length = 200

 Score =  251 bits (642), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 129/185 (69%), Positives = 140/185 (75%), Gaps = 3/185 (1%)

Query: 134 FQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKPKLSVLTHCNTGSLATAGYGTALG 193
           ++ YI+AAE+ML DDVASNRAIGSYGA+ IQHQ EK K SVLTHCNTGSLATAGYGTALG
Sbjct: 3   WEMYIDAAEVMLEDDVASNRAIGSYGASIIQHQTEKQKFSVLTHCNTGSLATAGYGTALG 62

Query: 194 VIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIPXX--XXXXXXXXXLMKSXXXX 251
           VIRALHS G LER YCTETRPFNQGSRLTAFELVH+K+              LMK+    
Sbjct: 63  VIRALHSAGVLERVYCTETRPFNQGSRLTAFELVHEKLSGTLISNSILLQLQLMKAGHVD 122

Query: 252 XXXXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGEEIVIEER- 310
                     SNGDTANKIGT SVAL AKFHNVPFYVAAPLTS DLSLSSG+EI +E R 
Sbjct: 123 AVVVGADRVASNGDTANKIGTDSVALSAKFHNVPFYVAAPLTSNDLSLSSGQEIDLESRL 182

Query: 311 SPKEL 315
            P+E 
Sbjct: 183 LPQEF 187


>Glyma11g21540.1 
          Length = 415

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 262 SNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSI-DLSLSSGEEIVIEERSPKELLN--S 318
           +NG     IG + VAL A+ H VPF V A    +  L   + + ++ E RSP ELL+   
Sbjct: 289 ANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLTELRSPSELLDFGE 348

Query: 319 RGGLGEQVAASG-ISVWNPAFDVTPANIISGIITEKG 354
              L +    SG + V NPAFD  P N++S  IT+ G
Sbjct: 349 FSDLMDSATGSGSLHVVNPAFDYVPPNLVSLFITDTG 385


>Glyma11g21540.2 
          Length = 391

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 262 SNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSI-DLSLSSGEEIVIEERSPKELLN--S 318
           +NG     IG + VAL A+ H VPF V A    +  L   + + ++ E RSP ELL+   
Sbjct: 265 ANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLTELRSPSELLDFGE 324

Query: 319 RGGLGEQVAASG-ISVWNPAFDVTPANIISGIITEKG 354
              L +    SG + V NPAFD  P N++S  IT+ G
Sbjct: 325 FSDLMDSATGSGSLHVVNPAFDYVPPNLVSLFITDTG 361