Miyakogusa Predicted Gene

Lj6g3v1177230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177230.1 tr|Q69P88|Q69P88_ORYSJ Os09g0439800 protein
OS=Oryza sativa subsp. japonica GN=OJ1344_B01.21 PE=4
SV,34.3,7e-19,coiled-coil,NULL; seg,NULL,CUFF.59195.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g08230.1                                                       174   6e-44
Glyma15g19790.1                                                       140   1e-33
Glyma07g04570.1                                                       105   5e-23
Glyma16g01150.1                                                       103   1e-22
Glyma19g45270.1                                                        87   2e-17
Glyma03g42490.1                                                        87   2e-17

>Glyma09g08230.1 
          Length = 262

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/276 (42%), Positives = 140/276 (50%), Gaps = 31/276 (11%)

Query: 1   MKIFLWXXXXXXXXXXXXXPT---SASTTHYMLHESCKQEFNDWPQAFLHIGTLA----- 52
           MKIF W              +   S ++ + M HE CKQEF+DWPQA L IGT       
Sbjct: 1   MKIFEWMQNRINGSNGKKKQSGSISTTSNYNMRHEPCKQEFSDWPQALLAIGTFGGNNLK 60

Query: 53  -------NSYAEDSFPFQKYTKEFKLEEVGKLQNELNMKXXXXXXXXXXXXXXXHSSLEP 105
                  N+ AEDS  FQ  T+E  LE+VG LQNE ++                H++   
Sbjct: 61  EDSGGRSNNTAEDSSSFQDCTQEITLEDVGNLQNEFSI---FFKGPNLAGEQEEHTN--D 115

Query: 106 AAQEVETISDVSNIKHGNFYPGNSLIHSTGRDLCYDXXXXXXXXXXXXX-XXXXMFACRK 164
             +E E+  D SN+  GNF P NS+I S G+D   D                  M AC+ 
Sbjct: 116 LIKENESPCDGSNVSRGNFCPSNSIIFSRGKDCSLDHSSKKGVGKKSLSFLLKKMLACKS 175

Query: 165 GFQPTPSFKDPLLSTDSRMEKILRAMLQKKIHPQGSSSTT-FVKKYLEKDQMPQFXXXXX 223
           GFQPTP FKD LLST+SRMEKILRA+L KKI+PQGS STT FVKKYLE   +        
Sbjct: 176 GFQPTPLFKD-LLSTESRMEKILRAILHKKIYPQGSCSTTPFVKKYLEATPI-------- 226

Query: 224 XXXXXXXXXXXXXPTSATNNGSKWVKTDSEYIVLEI 259
                          +A  NG KWVKTDSEYIVLEI
Sbjct: 227 SDDGEDDDDEEELAAAAAENGCKWVKTDSEYIVLEI 262


>Glyma15g19790.1 
          Length = 186

 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/196 (45%), Positives = 109/196 (55%), Gaps = 14/196 (7%)

Query: 66  TKEFKLEEVGKLQNELNMKXXXXXXXXXXXXXXXHSSLEPAAQEVETISDVSNIKHGNFY 125
           T+E  LE+VG LQ+E ++                H++     +E +++ D SN   GNFY
Sbjct: 3   TQEVTLEDVGNLQSEFSI---FFKGQNLAAEQEEHTN--DLIKENDSLCDGSNASRGNFY 57

Query: 126 PGNSLIHSTGRDLCYDXXXXXXXXXXXXX-XXXXMFACRKGFQPTPSFKDPLLSTDSRME 184
           P NS+I S G+D   D                  M AC+ GFQPTP FKDP LST+SRME
Sbjct: 58  PSNSIIFSRGKDCSLDHSSKKGVGKKSLSFLLKKMLACKSGFQPTPLFKDP-LSTESRME 116

Query: 185 KILRAMLQKKIHPQGSSSTT-FVKKYLEKDQMPQFXXXXXXXXXXXXXXXXXXPTSATNN 243
           KILRA+LQKKI+PQGS STT FVKKYLE   + QF                    +A  N
Sbjct: 117 KILRAILQKKIYPQGSCSTTPFVKKYLEATPISQFDDEEDDDEEEELA------AAAAEN 170

Query: 244 GSKWVKTDSEYIVLEI 259
           GSKWVKTDSEYIVLEI
Sbjct: 171 GSKWVKTDSEYIVLEI 186


>Glyma07g04570.1 
          Length = 263

 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 106/249 (42%), Gaps = 32/249 (12%)

Query: 28  YMLHESCKQEFNDWPQAFLHIGTLAN-SYAEDSFPFQKYTKE---------FKLEEVGKL 77
           Y+  +  ++EF+DWP   L IGT  N S  ++    Q   ++         F  EE+G L
Sbjct: 30  YLAKQEPREEFSDWPHGLLAIGTFGNKSEIKEDLDDQNTQEDPSSSEEIADFTPEEIGNL 89

Query: 78  QNELN--MKXXXXXXXXXXXXXXXH-----SSLEPAAQEVETISDVSNIKHGNFYPGNSL 130
           Q EL   ++                     SSLE   +    +   S  K  +     S+
Sbjct: 90  QKELTKLLRRKPNVEKEISELPLDRFLNCPSSLEVDRRISNALCSESEDKEEDIEKTLSV 149

Query: 131 IHSTGRDLCYDXXXXXXXXXXXXXXXXXMFACRKGFQPTPSFKDPLLSTDSRMEKILRAM 190
           I    +D+C D                 +F CR GF PTPS +D L   +SRMEK+LR M
Sbjct: 150 IIDKCKDICADKRKKAIGKKSISFLLKKIFVCRSGFAPTPSLRDTL--QESRMEKLLRTM 207

Query: 191 LQKKIHPQGSSSTTFVKKYLEKDQMPQFXXXXXXXXXXXXXXXXXXPTSATNNGSKWVKT 250
           L KKI+ Q SS +  VKK +E  +M +                         +G KWVKT
Sbjct: 208 LHKKIYTQNSSRSPLVKKGIEDKKMTR-------------KRNEDESDERNGDGCKWVKT 254

Query: 251 DSEYIVLEI 259
           DSEYIVLEI
Sbjct: 255 DSEYIVLEI 263


>Glyma16g01150.1 
          Length = 266

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 99/242 (40%), Gaps = 32/242 (13%)

Query: 35  KQEFNDWPQAFLHIGTLANSYAEDSFPFQKYTKE----------FKLEEVGKLQNELNMK 84
           ++EF+DWP   L IGT  N  A       + T+E          F  EE+G LQ EL   
Sbjct: 40  REEFSDWPHGLLAIGTFGNKTAIKEDLDDQNTQEDPSSSEEIADFTPEEIGNLQKELTKL 99

Query: 85  XXXXXXXXXXXXX-------XXHSSLEPAAQEVETISDVSNIKHGNFYPGNSLIHSTGRD 137
                                  SSLE   +    +   S  K  +     S+I    +D
Sbjct: 100 LRRKPNVEKEISELPLDRFLNCPSSLEVDRRISNALCSESEDKEEDIEKTLSVIIDKCKD 159

Query: 138 LCYDXXXXXXXXXXXXXXXXXMFACRKGFQPTPSFKDPLLSTDSRMEKILRAMLQKKIHP 197
           +C D                 +F CR GF PTPS +D L   +SRMEK+LR ML KKI  
Sbjct: 160 ICADKRKKAMGKKSISFLLKKIFLCRSGFAPTPSLRDTL--QESRMEKVLRTMLHKKICT 217

Query: 198 QGSSSTTFVKKYLEKDQMPQFXXXXXXXXXXXXXXXXXXPTSATNNGSKWVKTDSEYIVL 257
           Q SS +  VKK +E  +M +                         +G KWVKTDSEYIVL
Sbjct: 218 QNSSRSPLVKKCIEDKKMTR-------------KKNEDESDERNGDGCKWVKTDSEYIVL 264

Query: 258 EI 259
           EI
Sbjct: 265 EI 266


>Glyma19g45270.1 
          Length = 234

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 96/248 (38%), Gaps = 48/248 (19%)

Query: 35  KQEFNDWPQAFLHIGTLANS-----------YAEDSFPFQKYTKEFKLEEVGKLQNELNM 83
           ++EF+DWP   L IGT  NS             ED    ++   +F  EE+GKLQ EL  
Sbjct: 5   REEFSDWPDGLLAIGTFGNSNEVKEKTEKHILREDPSSSEEIA-DFTPEEIGKLQKELTK 63

Query: 84  KXXXXXXXXXXXXXXXHSSLEPAAQEVETISDVSNIKHGNFYPGN--------------- 128
                                     +E    +SN+   +    +               
Sbjct: 64  LLRQKPNVEKEIAELPLDRFLNCPSSLEVDRRISNVLCSDSEDKDKDEEEREKEEEEDIE 123

Query: 129 ---SLIHSTGRDLCYDXXXXXXXXXXXXXXXXXMFACRKGFQPTPSFKDPLLSTDSRMEK 185
              S+I    +++C +                 MF CR GF P PS KD L   +SRMEK
Sbjct: 124 KTLSVILGKFKEICANNSKKAIGKKSISFLLKKMFVCRSGFAPAPSLKDTLQLQESRMEK 183

Query: 186 ILRAMLQKKIHPQGSSSTTFVKKYLEKDQMPQFXXXXXXXXXXXXXXXXXXPTSATNNGS 245
           +LR +L KKI+ Q SS    +KK LE  +MP+                     +  ++G 
Sbjct: 184 LLRIILHKKINSQHSSRALSLKKRLEDRKMPK------------------EDEAENDDGC 225

Query: 246 KWVKTDSE 253
           KWVKTDSE
Sbjct: 226 KWVKTDSE 233


>Glyma03g42490.1 
          Length = 270

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 18/131 (13%)

Query: 129 SLIHSTGRDLCYDXXXXXXXXXXXXXXXXXMFACRKGFQPTPSFKDPLLSTDSRMEKILR 188
           S+I    +++C +                 MF CR GF P PS +D L   +SRMEK+LR
Sbjct: 158 SVILGKFKEICANNSKKAIGKKSISFLLKKMFVCRSGFAPAPSLRDTLQLQESRMEKLLR 217

Query: 189 AMLQKKIHPQGSSSTTFVKKYLEKDQMPQFXXXXXXXXXXXXXXXXXXPTSATNNGSKWV 248
            +L KKI+ Q SS    +KK LE  +MP+                     +  ++G KWV
Sbjct: 218 TILHKKINSQHSSRALSLKKRLEDRKMPK------------------EDEAENDDGCKWV 259

Query: 249 KTDSEYIVLEI 259
           KTDSEYIVLEI
Sbjct: 260 KTDSEYIVLEI 270